G354641


Basic Information

Item Value
gene id G354641
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 44005099 ~ 44005515 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU401838
ACCCACACTAGAGGAGACTCATTAACATCACAGTAcagggttaatatagacactagaGGAGACTCATTAACATCACAGTACAGGGATAATACAGACACTAGAGGAGACTCATTAACATCACAGTAcagggttaatatagacactagaGGAGACTCATTAACATCACAGTAcagggttaatatagacactgGAGGAGACTCATTAACATCACAGTAcagggttaatatagacactagaGGAGACTCATTAACATCACAGTACAGGGATAATAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106610361

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU401838 True 272 lncRNA 0.39 2 44005099 44005515

Neighbor

gene id symbol gene type direction distance location
slc2a12 slc2a12 coding upstream 236116 43740263 ~ 43768983 (+)
tbpl1 tbpl1 coding upstream 282558 43704019 ~ 43722541 (+)
rps12 rps12 coding upstream 713831 43286652 ~ 43291268 (+)
LOC118964509 NA coding upstream 717840 43287182 ~ 43287259 (+)
sh3bgrl2 LOC106608335 coding upstream 726784 43253892 ~ 43279017 (+)
myb myb coding downstream 79101 44084616 ~ 44110268 (+)
ppp1r14c ppp1r14c coding downstream 303958 44309473 ~ 44336978 (+)
nbas LOC104962557 coding downstream 395801 44401316 ~ 44700404 (+)
LOC118964488 NA coding downstream 930159 44933784 ~ 44937203 (+)
LOC110510408 hmgn3 coding downstream 1728127 45733642 ~ 45752953 (+)
G354635 NA non-coding upstream 7786 43995528 ~ 43997313 (+)
G354629 NA non-coding upstream 11339 43981799 ~ 43993760 (+)
G354590 aldh8a1 non-coding upstream 39852 43906437 ~ 43965247 (+)
G354643 NA non-coding downstream 1382 44006897 ~ 44041625 (+)
G354656 NA non-coding downstream 36254 44041769 ~ 44042054 (+)
G354658 NA non-coding downstream 38178 44043693 ~ 44060346 (+)
G354657 NA non-coding downstream 39964 44045479 ~ 44047607 (+)
G354680 NA non-coding downstream 93842 44099357 ~ 44099644 (+)
G354630 NA other upstream 14460 43990123 ~ 43990639 (+)
G354462 NA other upstream 393537 43610962 ~ 43611562 (+)
G353820 NA other upstream 1092922 42910886 ~ 42912213 (+)
G353339 NA other upstream 1553690 42451032 ~ 42451409 (+)
G354819 NA other downstream 454178 44459693 ~ 44461991 (+)
G355413 NA other downstream 969521 44975036 ~ 44975829 (+)
G355488 NA other downstream 1058098 45063613 ~ 45064026 (+)
G355753 NA other downstream 1614751 45620266 ~ 45624004 (+)

Expression


Co-expression Network