G354716


Basic Information

Item Value
gene id G354716
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 44190305 ~ 44191015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU401935
GCATGCCtctccatttttatttatttattgaaattGCACAAAGATATTGCAGTGCATGTTGGGATATCACTTTGCTCTTAATCCTAACTGGCTTTGTCGAAGTGGCGATCTGAGGGTCTAATGAACCCCTACACCCTCGATAATTTTCACTCCATGAGCTTCGGAACACTTGTGCAAATGTCGGAGGCGAGCGTGAACGGCGAGGGTCGAGTGTGAACGGCGAGGGGCGAGCGTGAACGGCGAGGGGCGAGCGTGAACGCGGAAATGGAAGGCTGAGGGAAAGGAAGTGATTTGTCATTTAGccactccctcgctctcccctTCTACCTCAaacagggatggagggaatagacaGACAACTGAAGGGAGGAGTGAGACTGAAAGAAGAGACATATAACCCGATATGAGAACGCTAAAagagtgcaaaactgtcatcaaggcaaaggctggctactttgaagaatctaaactataaaatatattttgatttgttgaacacattttcttggttactacatgattcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU401935 True 525 lncRNA 0.46 2 44190305 44191015

Neighbor

gene id symbol gene type direction distance location
myb myb coding upstream 80037 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 421322 43740263 ~ 43768983 (+)
tbpl1 tbpl1 coding upstream 467764 43704019 ~ 43722541 (+)
rps12 rps12 coding upstream 899037 43286652 ~ 43291268 (+)
ppp1r14c ppp1r14c coding downstream 118458 44309473 ~ 44336978 (+)
nbas LOC104962557 coding downstream 210301 44401316 ~ 44700404 (+)
LOC118964488 NA coding downstream 744659 44933784 ~ 44937203 (+)
LOC110510408 hmgn3 coding downstream 1542627 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 2355732 46546747 ~ 46575079 (+)
G354722 NA non-coding upstream 822 44189031 ~ 44189483 (+)
G354711 NA non-coding upstream 14393 44173518 ~ 44175912 (+)
G354691 NA non-coding upstream 62142 44125832 ~ 44128163 (+)
G354680 NA non-coding upstream 90661 44099357 ~ 44099644 (+)
G354658 NA non-coding upstream 129959 44043693 ~ 44060346 (+)
G354725 NA non-coding downstream 12027 44203042 ~ 44203609 (+)
G354750 NA non-coding downstream 60348 44251363 ~ 44266753 (+)
G354752 NA non-coding downstream 77273 44268288 ~ 44269650 (+)
G354757 NA non-coding downstream 84632 44275647 ~ 44276272 (+)
G354728 NA non-coding downstream 134890 44325905 ~ 44344882 (+)
G354630 NA other upstream 199666 43990123 ~ 43990639 (+)
G354462 NA other upstream 578743 43610962 ~ 43611562 (+)
sh3bgrl2 LOC106608335 other upstream 911288 43253892 ~ 43279017 (+)
G353820 NA other upstream 1278128 42910886 ~ 42912213 (+)
G354819 NA other downstream 268678 44459693 ~ 44461991 (+)
G355413 NA other downstream 784021 44975036 ~ 44975829 (+)
G355488 NA other downstream 872598 45063613 ~ 45064026 (+)
G355753 NA other downstream 1429251 45620266 ~ 45624004 (+)
G355763 enpp5 other downstream 1498420 45640503 ~ 45698847 (+)

Expression


Co-expression Network