G354757


Basic Information

Item Value
gene id G354757
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 44275647 ~ 44276272 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU402001
GACTGTGgtaataacagggggttagtggtTGGACTGTAGTAATAACAGGAGGTTAGTGGTTAGACTGTGgtaataacaggggGTTAGTGGTTAAACTGGTAATAACAAGGGGTTAGTGGTTGgactcatgatttggttgggtctaattgtgtttctgtcctggggctctgtagggtgtgtttgtgtttgtgaacagagccccaggaccagcttgcttaggggactcttctccaggttaacctctctgtaggtgatggctttgttatggaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU402001 True 270 lncRNA 0.46 2 44275647 44276272

Neighbor

gene id symbol gene type direction distance location
myb myb coding upstream 165379 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 506664 43740263 ~ 43768983 (+)
tbpl1 tbpl1 coding upstream 553106 43704019 ~ 43722541 (+)
rps12 rps12 coding upstream 984379 43286652 ~ 43291268 (+)
ppp1r14c ppp1r14c coding downstream 33201 44309473 ~ 44336978 (+)
nbas LOC104962557 coding downstream 125044 44401316 ~ 44700404 (+)
LOC118964488 NA coding downstream 659402 44933784 ~ 44937203 (+)
LOC110510408 hmgn3 coding downstream 1457370 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 2270475 46546747 ~ 46575079 (+)
G354752 NA non-coding upstream 5997 44268288 ~ 44269650 (+)
G354750 NA non-coding upstream 8894 44251363 ~ 44266753 (+)
G354725 NA non-coding upstream 72038 44203042 ~ 44203609 (+)
G354716 NA non-coding upstream 84632 44190305 ~ 44191015 (+)
G354722 NA non-coding upstream 86164 44189031 ~ 44189483 (+)
G354728 NA non-coding downstream 49633 44325905 ~ 44344882 (+)
G354774 NA non-coding downstream 54233 44330505 ~ 44330963 (+)
G354810 NA non-coding downstream 161861 44438133 ~ 44467906 (+)
G354818 NA non-coding downstream 177473 44453745 ~ 44456015 (+)
G354824 NA non-coding downstream 193657 44469929 ~ 44470340 (+)
G354630 NA other upstream 285008 43990123 ~ 43990639 (+)
G354462 NA other upstream 664085 43610962 ~ 43611562 (+)
sh3bgrl2 LOC106608335 other upstream 996630 43253892 ~ 43279017 (+)
G353820 NA other upstream 1363470 42910886 ~ 42912213 (+)
G354819 NA other downstream 183421 44459693 ~ 44461991 (+)
G355413 NA other downstream 698764 44975036 ~ 44975829 (+)
G355488 NA other downstream 787341 45063613 ~ 45064026 (+)
G355753 NA other downstream 1343994 45620266 ~ 45624004 (+)
G355763 enpp5 other downstream 1413163 45640503 ~ 45698847 (+)

Expression


Co-expression Network