G354810


Basic Information

Item Value
gene id G354810
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 44438133 ~ 44467906 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU402060
ctctctgtctctctctctgtctctctctctgtctctctctctctgtgtgtctctgtctctctctctctgtccctctctctctgtctctctctctctgtctctctctctctgtctctctctgtctctctctctctctctgtctctctctgtctcctctgtctctctctctgtgtgagactacttttggttactacatgatcccataagtgttatttcatagttttgatgtcttcactattattctacaatgtaaaaataaaatccCTTGAGTAGATGTGTCCTTTAGACCGGTGCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU402060 True 297 lncRNA 0.44 2 44438133 44467906

Neighbor

gene id symbol gene type direction distance location
ppp1r14c ppp1r14c coding upstream 101155 44309473 ~ 44336978 (+)
myb myb coding upstream 327865 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 669150 43740263 ~ 43768983 (+)
tbpl1 tbpl1 coding upstream 715592 43704019 ~ 43722541 (+)
rps12 rps12 coding upstream 1146865 43286652 ~ 43291268 (+)
LOC118964488 NA coding downstream 467768 44933784 ~ 44937203 (+)
LOC110510408 hmgn3 coding downstream 1265736 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 2078841 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 2107267 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 2226982 46694888 ~ 46745644 (+)
G354728 NA non-coding upstream 93251 44325905 ~ 44344882 (+)
G354774 NA non-coding upstream 107170 44330505 ~ 44330963 (+)
G354757 NA non-coding upstream 161861 44275647 ~ 44276272 (+)
G354752 NA non-coding upstream 168483 44268288 ~ 44269650 (+)
G354750 NA non-coding upstream 171380 44251363 ~ 44266753 (+)
G354824 NA non-coding downstream 2023 44469929 ~ 44470340 (+)
G354831 NA non-coding downstream 29621 44497527 ~ 44498630 (+)
G354833 NA non-coding downstream 35162 44503068 ~ 44504165 (+)
G354835 NA non-coding downstream 50103 44518009 ~ 44518425 (+)
G354837 NA non-coding downstream 55637 44523543 ~ 44524374 (+)
G354630 NA other upstream 447494 43990123 ~ 43990639 (+)
G354462 NA other upstream 826571 43610962 ~ 43611562 (+)
sh3bgrl2 LOC106608335 other upstream 1159116 43253892 ~ 43279017 (+)
G353820 NA other upstream 1525956 42910886 ~ 42912213 (+)
G355413 NA other downstream 507130 44975036 ~ 44975829 (+)
G355488 NA other downstream 595707 45063613 ~ 45064026 (+)
G355753 NA other downstream 1152360 45620266 ~ 45624004 (+)
G355763 enpp5 other downstream 1221529 45640503 ~ 45698847 (+)

Expression


Co-expression Network