Gene
RNA
| Item | Value |
|---|---|
| gene id | G355300 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 44705691 ~ 44706777 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| spore coat protein SP85-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU402812 | True | 239 | lncRNA | 0.60 | 2 | 44705691 | 44706777 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nbas | LOC104962557 | coding | upstream | 5287 | 44401316 ~ 44700404 (+) |
| ppp1r14c | ppp1r14c | coding | upstream | 368713 | 44309473 ~ 44336978 (+) |
| myb | myb | coding | upstream | 595423 | 44084616 ~ 44110268 (+) |
| slc2a12 | slc2a12 | coding | upstream | 936708 | 43740263 ~ 43768983 (+) |
| tbpl1 | tbpl1 | coding | upstream | 983150 | 43704019 ~ 43722541 (+) |
| LOC118964488 | NA | coding | downstream | 228897 | 44933784 ~ 44937203 (+) |
| LOC110510408 | hmgn3 | coding | downstream | 1026865 | 45733642 ~ 45752953 (+) |
| LOC110521126 | LOC105018054 | coding | downstream | 1839970 | 46546747 ~ 46575079 (+) |
| mapre3b | LOC106591799 | coding | downstream | 1868396 | 46575173 ~ 46607810 (+) |
| agbl5 | LOC106608376 | coding | downstream | 1988111 | 46694888 ~ 46745644 (+) |
| G354789 | NA | non-coding | upstream | 3902 | 44701097 ~ 44701789 (+) |
| G354877 | NA | non-coding | upstream | 22035 | 44683390 ~ 44683656 (+) |
| G354875 | NA | non-coding | upstream | 28564 | 44676764 ~ 44677127 (+) |
| G354873 | NA | non-coding | upstream | 31151 | 44671221 ~ 44674540 (+) |
| G354793 | NA | non-coding | upstream | 50512 | 44649526 ~ 44655179 (+) |
| G355325 | NA | non-coding | downstream | 32650 | 44739427 ~ 44739677 (+) |
| G355330 | NA | non-coding | downstream | 38984 | 44745761 ~ 44746112 (+) |
| G355353 | NA | non-coding | downstream | 116126 | 44822903 ~ 44824235 (+) |
| G355401 | NA | non-coding | downstream | 142391 | 44849168 ~ 44849701 (+) |
| G355402 | NA | non-coding | downstream | 152603 | 44859380 ~ 44859831 (+) |
| G354819 | NA | other | upstream | 243700 | 44459693 ~ 44461991 (+) |
| G354630 | NA | other | upstream | 715052 | 43990123 ~ 43990639 (+) |
| G354462 | NA | other | upstream | 1094129 | 43610962 ~ 43611562 (+) |
| sh3bgrl2 | LOC106608335 | other | upstream | 1426674 | 43253892 ~ 43279017 (+) |
| G355413 | NA | other | downstream | 268259 | 44975036 ~ 44975829 (+) |
| G355488 | NA | other | downstream | 356836 | 45063613 ~ 45064026 (+) |
| G355753 | NA | other | downstream | 913489 | 45620266 ~ 45624004 (+) |
| G355763 | enpp5 | other | downstream | 982658 | 45640503 ~ 45698847 (+) |
