G355330


Basic Information

Item Value
gene id G355330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 44745761 ~ 44746112 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU402852
tagacctcactcccccctatctgagatatctactgcagccctcatcctccacatacaacacccgttctgccagtcacattctgttaaaggtccccaaagcacacacatccctgggtcgctcctcttttcagtttgcttcagctagcgactggaacgagctgcaacaaacactcaaactggacagttttatctcaatctcttcattcaaagactcaatcatggaaactcttactgacagttgtggctgctttgtgtaatgtattgttgtctctaccttcttgactttgtgctgttgactgtgcccaataatgtttgtaccatgttatgtgtttctaccatgttgtgttgctac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU402852 True 352 lncRNA 0.45 1 44745761 44746112

Neighbor

gene id symbol gene type direction distance location
nbas LOC104962557 coding upstream 45357 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 408783 44309473 ~ 44336978 (+)
myb myb coding upstream 635493 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 976778 43740263 ~ 43768983 (+)
tbpl1 tbpl1 coding upstream 1023220 43704019 ~ 43722541 (+)
LOC118964488 NA coding downstream 189562 44933784 ~ 44937203 (+)
LOC110510408 hmgn3 coding downstream 987530 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 1800635 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 1829061 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 1948776 46694888 ~ 46745644 (+)
G355325 NA non-coding upstream 6084 44739427 ~ 44739677 (+)
G355300 NA non-coding upstream 38984 44705691 ~ 44706777 (+)
G354789 NA non-coding upstream 43972 44701097 ~ 44701789 (+)
G354877 NA non-coding upstream 62105 44683390 ~ 44683656 (+)
G354875 NA non-coding upstream 68634 44676764 ~ 44677127 (+)
G355353 NA non-coding downstream 76791 44822903 ~ 44824235 (+)
G355401 NA non-coding downstream 103056 44849168 ~ 44849701 (+)
G355402 NA non-coding downstream 113268 44859380 ~ 44859831 (+)
G355407 NA non-coding downstream 186355 44932467 ~ 44938219 (+)
G354819 NA other upstream 283770 44459693 ~ 44461991 (+)
G354630 NA other upstream 755122 43990123 ~ 43990639 (+)
G354462 NA other upstream 1134199 43610962 ~ 43611562 (+)
sh3bgrl2 LOC106608335 other upstream 1466744 43253892 ~ 43279017 (+)
G355413 NA other downstream 228924 44975036 ~ 44975829 (+)
G355488 NA other downstream 317501 45063613 ~ 45064026 (+)
G355753 NA other downstream 874154 45620266 ~ 45624004 (+)
G355763 enpp5 other downstream 943323 45640503 ~ 45698847 (+)

Expression


Co-expression Network