G355407


Basic Information

Item Value
gene id G355407
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 44932467 ~ 44938219 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU402950
TGAGTCCATTTCTGATATTTATTTTGATAAGGGAAGTTGTTTACACAACCCTGGGGAAAACACAGAGCCTCGGTAACAAGTCCTCTAGACCACAGTGTgaaagaggaacacacacacacacacacacacacacacacacacacacacacaccctctctctcacctcctctgtGTCTTTGAGTGTGCAGACGTGGTATGGCATGGAGACTAGAGTCTGGTCCTTGCGGTCAGCGATGTAGAGCCACCACCACTCATGTTTCTCCTCTGGGTAGTACAGGCTGTAGACGGGGTGGGTCACCTTAGACTTGGTCTCCAACAGCGCCCTCTCCCTTCGCTGGACACTCTGCTGCAGAGCCTCCCACTcctgggggggggagagagatggaggggggggttATACATAGTCTATACCACTgatctccaaccttgttcctggagacagaccctcctgtaggttttaactccaaccctgttcctggagagataccctcc

Function

NR:

description
PREDICTED: translocation protein SEC63 homolog isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU402950 True 492 lncRNA 0.52 3 44932467 44938219

Neighbor

gene id symbol gene type direction distance location
nbas LOC104962557 coding upstream 232063 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 595489 44309473 ~ 44336978 (+)
myb myb coding upstream 822199 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 1163484 43740263 ~ 43768983 (+)
tbpl1 tbpl1 coding upstream 1209926 43704019 ~ 43722541 (+)
LOC110510408 hmgn3 coding downstream 795423 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 1608528 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 1636954 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 1756669 46694888 ~ 46745644 (+)
G355402 NA non-coding upstream 72636 44859380 ~ 44859831 (+)
G355401 NA non-coding upstream 82766 44849168 ~ 44849701 (+)
G355353 NA non-coding upstream 108232 44822903 ~ 44824235 (+)
G355330 NA non-coding upstream 186355 44745761 ~ 44746112 (+)
G355325 NA non-coding upstream 192790 44739427 ~ 44739677 (+)
G355411 NA non-coding downstream 106 44938325 ~ 44939825 (+)
G355445 NA non-coding downstream 14043 44952262 ~ 44952664 (+)
G355449 NA non-coding downstream 28156 44966375 ~ 44967061 (+)
G355410 NA non-coding downstream 39055 44977274 ~ 44991382 (+)
G355454 NA non-coding downstream 41141 44979360 ~ 44985071 (+)
G354819 NA other upstream 470476 44459693 ~ 44461991 (+)
G354630 NA other upstream 941828 43990123 ~ 43990639 (+)
G354462 NA other upstream 1320905 43610962 ~ 43611562 (+)
sh3bgrl2 LOC106608335 other upstream 1653450 43253892 ~ 43279017 (+)
G355413 NA other downstream 36817 44975036 ~ 44975829 (+)
G355488 NA other downstream 125394 45063613 ~ 45064026 (+)
G355753 NA other downstream 682047 45620266 ~ 45624004 (+)
G355763 enpp5 other downstream 751216 45640503 ~ 45698847 (+)

Expression


Co-expression Network