G355411


Basic Information

Item Value
gene id G355411
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 44938325 ~ 44939825 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU402958
CTGATCTATACACACACAGGTCTTTTCTCCTAAAGTGTACACATCCTCTACTCCGACAGCGTGAATCGGTGACGTTCGACTTCAGAGATGGGTAACTGCAGTCCTCTGGGGCCGGAGTGGTTCACACCCCCATCGctagcaaacacacctgattaaactaatcacATTCTACATCaggattagttgattattggagtcaggtgtgttagctggaccTGGGGCTAAGGTGTGACACCTCCCAGGACTGGAGTTACCCATGTGCTCGGggagtttcacacacacacacacgggtttctgacctcctcgtcGTCCCCGGCGATCTCATCCTGCTCCGTGTCGCTCTGTTTGtcactctcctcatctctctcgctcGGAGAATCTTTGTTACCCTCGCCCTCCTCCGATTCGCTGCCTTTGTCTGACctgtcctcctcatcttccttcGCCACGGCAACCACCTCACTTCCTGACGCGCTCCCATTGGCCTGTTTGGCCTTGGCTGCTGGCAGTGGGAGGGGCTTCTTCTTGGTGAGTTTCTTCTTCTTTGACTGCTTGGTTTTCTTGGCTGCTTTGGTCTTGTTCTGCCACACCTTGGCTTTGGTTTTACTGACGTCTCCCTGCGCGACAGCATCCTCTGTACTGGCTTCCTCTCCGACTCCGAGACACGGTGTCACATTCTGCTCCTTTTCAAA

Function

NR:

description
translocation protein SEC63 homolog, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU402958 True 692 lncRNA 0.53 3 44938325 44939825

Neighbor

gene id symbol gene type direction distance location
LOC118964488 NA coding upstream 1122 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 237921 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 601347 44309473 ~ 44336978 (+)
myb myb coding upstream 828057 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 1169342 43740263 ~ 43768983 (+)
LOC110510408 hmgn3 coding downstream 793817 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 1606922 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 1635348 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 1755063 46694888 ~ 46745644 (+)
G355407 NA non-coding upstream 106 44932467 ~ 44938219 (+)
G355402 NA non-coding upstream 78494 44859380 ~ 44859831 (+)
G355401 NA non-coding upstream 88624 44849168 ~ 44849701 (+)
G355353 NA non-coding upstream 114090 44822903 ~ 44824235 (+)
G355445 NA non-coding downstream 12437 44952262 ~ 44952664 (+)
G355449 NA non-coding downstream 26550 44966375 ~ 44967061 (+)
G355410 NA non-coding downstream 37449 44977274 ~ 44991382 (+)
G355454 NA non-coding downstream 39535 44979360 ~ 44985071 (+)
G355473 NA non-coding downstream 84789 45024614 ~ 45025668 (+)
G354819 NA other upstream 476334 44459693 ~ 44461991 (+)
G354630 NA other upstream 947686 43990123 ~ 43990639 (+)
G354462 NA other upstream 1326763 43610962 ~ 43611562 (+)
sh3bgrl2 LOC106608335 other upstream 1659308 43253892 ~ 43279017 (+)
G355413 NA other downstream 35211 44975036 ~ 44975829 (+)
G355488 NA other downstream 123788 45063613 ~ 45064026 (+)
G355753 NA other downstream 680441 45620266 ~ 45624004 (+)
G355763 enpp5 other downstream 749610 45640503 ~ 45698847 (+)

Expression


Co-expression Network