G355449


Basic Information

Item Value
gene id G355449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 44966375 ~ 44967061 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU402996
ccctctctatgtctgtgtgtctctctggctctctctctgtgtctctctggctctctctctgtgtgtctctctctcgctctctctgtctgtctctctctctctgtatcgctctctctgtctctctcgctctctgtctctctcgctctctgtctctctcgctctctgtctctctcgctctctgtctctctcgctctctgtctctctcgctctctgtgtgtctcgctctgtgtgtctcgctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU402996 True 239 lncRNA 0.55 2 44966375 44967061

Neighbor

gene id symbol gene type direction distance location
LOC118964488 NA coding upstream 29172 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 265971 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 629397 44309473 ~ 44336978 (+)
myb myb coding upstream 856107 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 1197392 43740263 ~ 43768983 (+)
LOC110510408 hmgn3 coding downstream 766581 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 1579686 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 1608112 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 1727827 46694888 ~ 46745644 (+)
G355445 NA non-coding upstream 13711 44952262 ~ 44952664 (+)
G355411 NA non-coding upstream 26550 44938325 ~ 44939825 (+)
G355407 NA non-coding upstream 28156 44932467 ~ 44938219 (+)
G355402 NA non-coding upstream 106544 44859380 ~ 44859831 (+)
G355410 NA non-coding downstream 10213 44977274 ~ 44991382 (+)
G355454 NA non-coding downstream 12299 44979360 ~ 44985071 (+)
G355473 NA non-coding downstream 57553 45024614 ~ 45025668 (+)
G355480 NA non-coding downstream 75745 45042806 ~ 45043700 (+)
G355458 NA non-coding downstream 85864 45052925 ~ 45053349 (+)
G354819 NA other upstream 504384 44459693 ~ 44461991 (+)
G354630 NA other upstream 975736 43990123 ~ 43990639 (+)
G354462 NA other upstream 1354813 43610962 ~ 43611562 (+)
sh3bgrl2 LOC106608335 other upstream 1687358 43253892 ~ 43279017 (+)
G355413 NA other downstream 7975 44975036 ~ 44975829 (+)
G355488 NA other downstream 96552 45063613 ~ 45064026 (+)
G355753 NA other downstream 653205 45620266 ~ 45624004 (+)
G355763 enpp5 other downstream 722374 45640503 ~ 45698847 (+)

Expression


Co-expression Network