G355410


Basic Information

Item Value
gene id G355410
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 44977274 ~ 44991382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU402954
TCTTCATTTATTGTCCAACTGTTGCATTTATTAGAATAGTAAACATTTTAATGACTGTTGCTGCTTTACAAATCATTGCAGATGACTGGGAGGAGACGAGGACAGAAGGCACCCCTACATCTAGGATGTCACTCTGCCGGGCCCTTTATGATGATGTCACAGGTGTACCATGATGTCGTCGAGTGGCTTGCGGGTGAGGTCGGGCACGGTGGCGTCGGGGGCGGGGTAACCAACAGGAAGTAGCATCAGCAGCTTCTCATTGGCTGGCCGACCGAGGAGCAGCCTGAGCTGGGGGCCGCAGTTGAGGGGCGTCGTCGTCACCGTCACCAGACCTGCATTCTGCAGCGCGGCCAATAGCAGGCCACAGGAGATGGACACACTGATCTCATTGTAGTAATGagtcctcttctgtcctccagCGACGATGCCGTACGTCTGTTTAAATATCAACACGAGGTAGGGAGCCACATCAAGATACTGCTTCACCCAGTTAgtcCTGAGCCTCTGCAGGTCACTGACCCACTTGTCCCCCATCCTCTGGCGGTAGttgacttcctcctcctcctccaccactagcCTGATCTGGTGCTTCACCTCTGGGTCTGACACCACCACAAACGTCCAGGGTTCTGTGTGGGCTCCACTGGGGGCTGTGCCTGCAGTGCGGATGACGTTGTCGATGACCTGTCGTGGAACGGGCTCGGGGCTGATGAATCGGACAGACCTCCTCTGGTTCATCAGACTGAAGAAGTCCTGTGACCTCTGAACCATGACCTCTACGGGGTACCGAGAAGCTGGGTAGGGCACGTGGGCCAGCTCCTCCTCCCCACCACTCTCCACCCAATCACCATCCTCTTCATCTTTGTGTCGGATCTCTGTGTCGTCCTGAAGATCCTCGTCCACCCACGGTCGGGCCTCGGCCTCGGGCTTCCGCTCGGGTTTCACTGCCTTGTTCTCCTTCTTCTGAGAGCTTTTGAACAGAAAAACTAGGATCACGCATAAAACAGCCACGAACACCGGCGTGAGAGTGGAGAGAAGGGCCATGCTGACTGACGGCGATAATCTGAACACAACTGATAGAAACAGACAGTCTGCCAGCCAGGCGGGCGCTC

Function

NR:

description
iodotyrosine deiodinase 1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU402954 True 1112 lncRNA 0.56 5 44977274 44991382

Neighbor

gene id symbol gene type direction distance location
LOC118964488 NA coding upstream 40071 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 276870 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 640296 44309473 ~ 44336978 (+)
myb myb coding upstream 867006 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 1208291 43740263 ~ 43768983 (+)
LOC110510408 hmgn3 coding downstream 742260 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 1555365 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 1583791 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 1703506 46694888 ~ 46745644 (+)
G355449 NA non-coding upstream 10213 44966375 ~ 44967061 (+)
G355445 NA non-coding upstream 24610 44952262 ~ 44952664 (+)
G355411 NA non-coding upstream 37449 44938325 ~ 44939825 (+)
G355407 NA non-coding upstream 39055 44932467 ~ 44938219 (+)
G355473 NA non-coding downstream 33232 45024614 ~ 45025668 (+)
G355480 NA non-coding downstream 51424 45042806 ~ 45043700 (+)
G355458 NA non-coding downstream 61543 45052925 ~ 45053349 (+)
G355487 NA non-coding downstream 70385 45061767 ~ 45062619 (+)
G355676 NA non-coding downstream 364856 45356238 ~ 45356681 (+)
G355413 NA other upstream 1445 44975036 ~ 44975829 (+)
G354819 NA other upstream 515283 44459693 ~ 44461991 (+)
G354630 NA other upstream 986635 43990123 ~ 43990639 (+)
G354462 NA other upstream 1365712 43610962 ~ 43611562 (+)
G355488 NA other downstream 72231 45063613 ~ 45064026 (+)
G355753 NA other downstream 628884 45620266 ~ 45624004 (+)
G355763 enpp5 other downstream 698053 45640503 ~ 45698847 (+)
G356586 hadhb other downstream 1374844 46366226 ~ 46388253 (+)

Expression


Co-expression Network