G355454


Basic Information

Item Value
gene id G355454
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 44979360 ~ 44985071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU403004
tgcttgtgttcctagctccaacagtgcagtaatatctaactaaatgcttgtgttcctagctccaacagtaatacctacctaaatgctccgtaaacactccacccagctggtctgcacatgctctgaggacgcggctagggatgccgtctgagcCGGCAGCCTTGTgtgggttaacacgcttaaatgtcttactcacgtcgaccACGGAGGACCACAGTCCTTGGCCGAGGGCTGCGTCGGtagcactgtgttatcctcaaagcgggtgaagaaggtgtttagcttgtctgggagcaagtcgtcagtggctggttttccctttgtaatttgTCATTGtccacatacatctcgtgtctgagcaGTTGAATTCCGACTCCACTttgtactgatgttttgcctgtttgattgactTACGGAGGGCATAGCTGGACAGTTTGTACTCAACCATATTTCCAGTGACCTTGTCGTGGTTTGCGCTTTcacggtttttggtttgggtaggttttaatagtcatagTGGGAaaaacatcccctatacacttcctgatgaactcagtcaccgtgtaaacgtcaatgttattctcagaggctacccgggaACAAATcacagtccgcgtgatcaaactatcttgaagcatggattacGATTTGTCAGACCAGCATTAAATAGATcttagcatgggtacttcctgtttgagtttctgcctataggaagggtaGAGCAGAAGGGAggtgtgatctgatttgccgatgGGAGGGCAGGGGAGGTCCTTGTAGCCATCCCGAAAGGGAGAGGGACAATGGTCGAGAGTTTTTGAAGCACAAGTACAAcaggcaatgtgttgatagaacttcggtaatGTTTTCCTCCCAAAATGtttttgttaaaatccccagctacaataaatgtggcctcGGGATATGTAGTTTCCTGTTAGCACAAAGCCAAGTGTAGTTCCTTGaaggccgtcgtggtatcggcttgagggggaatatacacggttgtgactataaccgaagagaattatCTGGGGCGGTAAtatgattgtgaggtattctaggtcaggtgaacaaaataacttgagttcctgtacgttattacaatcacaccatgagtagttaatcatgaaacatacacctccacctttcttcttcccggagagttctttattcctgtctgcccaatgtactgagaacccagctggctgtatggacggggacagtatatccagagagttctttattcctgtctgcccgatgtactgagaacccagctggctgtatggatggggacagtatatccagagagttctttattcctgtctgcccgatgtactgagaacccagctggctgtatggacggggacagtatatccagagagttctttatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU403004 True 1391 lncRNA 0.47 2 44979360 44985071

Neighbor

gene id symbol gene type direction distance location
LOC118964488 NA coding upstream 42157 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 278956 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 642382 44309473 ~ 44336978 (+)
myb myb coding upstream 869092 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 1210377 43740263 ~ 43768983 (+)
LOC110510408 hmgn3 coding downstream 748571 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 1561676 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 1590102 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 1709817 46694888 ~ 46745644 (+)
G355449 NA non-coding upstream 12299 44966375 ~ 44967061 (+)
G355445 NA non-coding upstream 26696 44952262 ~ 44952664 (+)
G355411 NA non-coding upstream 39535 44938325 ~ 44939825 (+)
G355407 NA non-coding upstream 41141 44932467 ~ 44938219 (+)
G355473 NA non-coding downstream 39543 45024614 ~ 45025668 (+)
G355480 NA non-coding downstream 57735 45042806 ~ 45043700 (+)
G355458 NA non-coding downstream 67854 45052925 ~ 45053349 (+)
G355487 NA non-coding downstream 76696 45061767 ~ 45062619 (+)
G355676 NA non-coding downstream 371167 45356238 ~ 45356681 (+)
G355413 NA other upstream 3531 44975036 ~ 44975829 (+)
G354819 NA other upstream 517369 44459693 ~ 44461991 (+)
G354630 NA other upstream 988721 43990123 ~ 43990639 (+)
G354462 NA other upstream 1367798 43610962 ~ 43611562 (+)
G355488 NA other downstream 78542 45063613 ~ 45064026 (+)
G355753 NA other downstream 635195 45620266 ~ 45624004 (+)
G355763 enpp5 other downstream 704364 45640503 ~ 45698847 (+)
G356586 hadhb other downstream 1381155 46366226 ~ 46388253 (+)

Expression


Co-expression Network