G355480


Basic Information

Item Value
gene id G355480
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 45042806 ~ 45043700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU403036
actaactgacccagtgtctgtaatacctcctgactaactgacccagtgtctgtaatacctcctgactaactgacccagtgtctgtaatacctcctgactaactgacccagtgtctgtaatacctactaactgacccagtgtctgtaatacctcCTGACTAACTGACCCAGCGTCTGTAATActtcctgactgactgacccagtgtctgtaatacctcctgactgactgacccagtgtctgtaatacctcctgactaactgacccagtgtctgtaatacctcctgactaactgacccagtgtctgtaatacctcctgactaactgacccagtgtctgtaatacctcctgactgactCAGCGTCTGTAATACCTCCTGACTAACTGACCCAGCGTCTGTAATACccactgactaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU403036 True 415 lncRNA 0.47 2 45042806 45043700

Neighbor

gene id symbol gene type direction distance location
LOC118964488 NA coding upstream 105603 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 342402 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 705828 44309473 ~ 44336978 (+)
myb myb coding upstream 932538 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 1273823 43740263 ~ 43768983 (+)
LOC110510408 hmgn3 coding downstream 689942 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 1503047 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 1531473 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 1651188 46694888 ~ 46745644 (+)
G355473 NA non-coding upstream 17138 45024614 ~ 45025668 (+)
G355410 NA non-coding upstream 51424 44977274 ~ 44991382 (+)
G355454 NA non-coding upstream 57735 44979360 ~ 44985071 (+)
G355449 NA non-coding upstream 75745 44966375 ~ 44967061 (+)
G355445 NA non-coding upstream 90142 44952262 ~ 44952664 (+)
G355458 NA non-coding downstream 9225 45052925 ~ 45053349 (+)
G355487 NA non-coding downstream 18067 45061767 ~ 45062619 (+)
G355676 NA non-coding downstream 312538 45356238 ~ 45356681 (+)
G355704 NA non-coding downstream 416644 45460344 ~ 45492400 (+)
G355753 NA non-coding downstream 576566 45620266 ~ 45624004 (+)
G355413 NA other upstream 66977 44975036 ~ 44975829 (+)
G354819 NA other upstream 580815 44459693 ~ 44461991 (+)
G354630 NA other upstream 1052167 43990123 ~ 43990639 (+)
G354462 NA other upstream 1431244 43610962 ~ 43611562 (+)
G355488 NA other downstream 19913 45063613 ~ 45064026 (+)
G355763 enpp5 other downstream 645735 45640503 ~ 45698847 (+)
G356586 hadhb other downstream 1322526 46366226 ~ 46388253 (+)

Expression


Co-expression Network