G355569


Basic Information

Item Value
gene id G355569
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 45102166 ~ 45107116 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU403166
ttccctctgaccctaacccttccctctgaccctaacccttccctctgaccctaacccttccctctgaccctgaccctaacccttccctctgaccctaacccttccctctgaccctaacccttccctctgaccctaacccttccctctgaccccAACCCTTCGTTCTGTTACgctttgtgtttctgtgttgtcTTTTGGTTTTACAACAAAAGGTCAAACGGTAGCTACCTCCCTGTGTAAACAACATGCTGACCAGATGATTATTTCATAATGATTCGCTGATTTTTCTGTCCAGCATCCATAACAAGTTTACATCATGTGTTTTTGTGTTGTCTATGTTCTGTCACCTCTCTCACCAGGCCCCGTCAGGTGCAATGGTGTTAGAGGCTTTAGAGACTTTCAGAAAGATCTCTcacctcctctgctctcctctgtagttgactagtctcctctggtctctgtagttgactggtctcctctgtagttggctggtctcctctgtagttgactggtctcctcaagtctctgtagttgactggtctcctctggtctctgtagttgactggtctcctctggtctcctctgtagttgactggtctcctctgtagttgactggtctcctctgtagttgactggtctcctctggtctcctctgtagttgactggtctcctctggtctcttctgtagttgactggtctcctctgtagttgactggtctcctctgtagttgactggtctcctctgtagttgactggtctcctctggtctctgtagTTGActgtctcctctggtctctgtagttgactggtctcctctggtctcctctgtagttgactggtctcctctggtctcctctgtagttgactggtctcctctggtctcctctgtagttgactggtctcctctgtagttgactggtctcctctggtctcctctgtagttgagtggtctcctctggtctcctctgtagttgaGTGGTCTCGTCTGGTctctgtagttgactggtctcctctggtctcctctgtatttgactggtctcctctggtctcctctgtagttgacttgtctcctctggtctcctctgtagttgactggtctcctctggtctcctctgtagttgacttgtctcctctggtctcctctgttTTTGACTGGTTTTCTCCACAGGTGaaatatctcctctagtcagaagcCCTATTTACACCATTTCTAACATGCAGCCTTCATCCTTATCTTGTCCTGGTTTTGACCTGATCTTGTCCATTTTCACTTATAAGATCAGATCACAATGCATATTTTAACTGTCTACTCCGTTATAAAAATGTGGGCAAAATCAAGACATGGGAcacatgttagcaccaggtataaacggggcttTAGTGTGGTACTGTTCATCTCAGTCAATCTGTCATTTGGACAAACAACTTTTTCAAAAGGGACAAGCAAGCTGACAACAGTGAGT

Function

NR:

description
proline-rich 33 kDa extensin-related protein-like, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU403166 True 1463 lncRNA 0.48 3 45102166 45107116

Neighbor

gene id symbol gene type direction distance location
si:ch73-21k16.5 LOC105017985 coding downstream 10109 45045372 ~ 45092057 (-)
fam228a NA coding downstream 65866 45009301 ~ 45036300 (-)
iyd iyd coding downstream 110506 44977284 ~ 44991660 (-)
sec63 LOC106593828 coding downstream 127504 44932460 ~ 44974662 (-)
lratd1 fam84a coding downstream 254120 44838686 ~ 44848046 (-)
LOC110521125 runx2 coding upstream 10797 45117913 ~ 45340630 (-)
LOC110510406 LOC105017981 coding upstream 516111 45623227 ~ 45683833 (-)
LOC118964489 NA coding upstream 582323 45689439 ~ 45690477 (-)
enpp5 enpp5 coding upstream 584281 45639508 ~ 45710259 (-)
tfap2d tfap2d coding upstream 753593 45860709 ~ 45901843 (-)
G355556 NA non-coding downstream 32922 45068941 ~ 45069244 (-)
G355550 NA non-coding downstream 58343 45040150 ~ 45043823 (-)
G355548 NA non-coding downstream 66587 45033523 ~ 45035579 (-)
G355523 NA non-coding downstream 123930 44977867 ~ 44978236 (-)
G355497 NA non-coding downstream 223677 44877889 ~ 44878489 (-)
G355570 NA non-coding upstream 1189 45108305 ~ 45108536 (-)
G355791 NA non-coding upstream 6890 45114006 ~ 45114459 (-)
G355876 NA non-coding upstream 205833 45312949 ~ 45316322 (-)
G355900 NA non-coding upstream 266148 45373264 ~ 45377084 (-)
G355909 NA non-coding upstream 282582 45389698 ~ 45432715 (-)
G355557 NA other downstream 30533 45069628 ~ 45071633 (-)
G355378 NA other downstream 295397 44805555 ~ 44806769 (-)
G355110 NA other downstream 911148 44190309 ~ 44191018 (-)
G354975 NA other downstream 1260048 43840907 ~ 43842118 (-)
G354961 NA other downstream 1329487 43772194 ~ 43772679 (-)
G356333 NA other upstream 704549 45811665 ~ 45844445 (-)

Expression

G355569 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G355569 Expression in each Bioproject

Bar chart with 14 bars.
G355569 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 80.
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Co-expression Network