G355753


Basic Information

Item Value
gene id G355753
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 45620266 ~ 45624004 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU403385
ATCTGTGAAAATATGATTTTATTTCCTAGCGGTCCACTCTAAACATGGCTCTTCTTTCAGATCACATGACCATCCAAACCACACCAGAACACTATGGGTCAGAACAGGAAGCACACAGGTTATAGACAGGAAGTCAGCCAAAGACCACGAGACAGAGACTGATGACTGTTTTACCCTgaatggacaataaagttttaGAATCTGAACTCGCTGCGTGGAACATGTGTCTGCGTTCCAGGCTGACTACATTACAGATGCCTGCCAGACTTTAACCACTCTAGGGTGGATCTGGTAGATTGTCATCGCCCAGGCCTGAATGGTCTCTACATAAATATTCTCTGAATCTAAAGTCATCTCTGTTGACTCCATATTAAACCGACATGACGGACACGTTCTAACAACTGATAGCTAGAGGCTAAATATTCTAAACACCTGTCCGTATGACAAACGTTTAGGATTTAATTTAATAAAGAATGTTATTATCATGTTAATCAATCCATTTTTACTTGGCTTGGAATTTGGACATTTCCAAATAGGCACATGGTTCAGGATGAGATCCATTCTAGAACTAGTTCTGATGAACAATCAAAGTTAAACAATAGCAACAACGTAGCAACAGGTTTATTCAGGAGAACCAACCAGAAGAGAGCTTTGTTCCAGGCTTCTATCAGAGGCCAAACACAGTATAAAGTGCTTCCCTATAaaaaccctgttccctataataaccctgttccctatagtcACCATGTTCCTTATAGtaaccctgttccctataataaccctgttctctataataaccctgttccctatagtaaccctgttccctatggtgCTGGTCATGATTAGTGCACTATAGGGCAATAGGGCCCTGGAATGCACCCATAGTAATGTTCTCTTAATACACAACGCCGTTTCTCCTTGTTTGTTCAAAAGTTTTTAAAATACATTAAAATTTGTTAACAAATTATCAAATCAACTTCTCAACATAAGATCTGTCTCAAATAGAGAGACTACAGCAAAACGATATGAAAATCAACCAAGTGAAGCTCGTGATTGTAATGGACCTTTCAACACAGTGTATTATCAATTACAgatcaatacatcaatcaataTATTAGTATAATCAGTAGCCAGATGTTGATGGTGGAGGCAGACTACAGCAGGGGAAATTATGAATAAATACAACCAGCTGGTCACTGTGGACTGGCTTCATGGTAACTGCTGATATGGGTTGGGATTAGGAGTCAACGGGTTAAAAATCACGCTTGTAGGTTAGAAGTCAGGGGTTAGagatcaggggttagaggtcaggggttagaggtcagggattAGAGGTCAGGGATTAGAGAtaaggggttagaggtcaggggttagaggtcaggggttaggttTCAAGGGGTTAAAAATCAGGCTTGTAGTTTAGAggacaggggttagaggtcaggggttagaggccaGGGGTTAAAAATCATGGTTGTAGGTTAGGGGTTAAATGTCACTTCTCCAGTCTCTTGGCCACATCCAGGTAAGCCATCTCTATCTCGTTGTCGGCAGCGCAGGTGTTGGTGAACTCGTCTCGTGTGTAGGCATTCTTCAGATAGCGCCACACCCCACCCAGCTCTGACGGAATCTCATAGTTACGATACTTCTTAGCAACCACCTGGtaacaaaacacagagagaacacacctcACACTCAGGTAATAG
>TU403390
ATCTGTGAAAATATGATTTTATTTCCTAGCGGTCCACTCTAAACATGGCTCTTCTTTCAGATCACATGACCATCCAAACCACACCAGAACACTATGGGTCAGAACAGGAAGCACACAGGTTATAGACAGGAAGTCAGCCAAAGACCACGAGACAGAGACTGATGACTGTTTTACCCTgaatggacaataaagttttaGAATCTGAACTCGCTGCGTGGAACATGTGTCTGCGTTCCAGGCTGACTACATTACAGATGCCTGCCAGACTTTAACCACTCTAGGGTGGATCTGGTAGATTGTCATCGCCCAGGCCTGAATGGTCTCTACATAAATATTCTCTGAATCTAAAGTCATCTCTGTTGACTCCATATTAAACCGACATGACGGACACGTTCTAACAACTGATAGCTAGAGGCTAAATATTCTAAACACCTGTCCGTATGACAAACGTTTAGGATTTAATTTAATAAAGAATGTTATTATCATGTTAATCAATCCATTTTTACTTGGCTTGGAATTTGGACATTTCCAAATAGGCACATGGTTCAGGATGAGATCCATTCTAGAACTAGTTCTGATGAACAATCAAAGTTAAACAATAGCAACAACGTAGCAACAGGTTTATTCAGGAGAACCAACCAGAAGAGAGCTTTGTTCCAGGCTTCTATCAGAGGCCAAACACAGTATAAAGTGCTTCCCTATAaaaaccctgttccctataataaccctgttccctatagtcACCATGTTCCTTATAGTAACCACGTTCCCTATaataaccctgttccctataataaccctgttccctataataaccctgttccctatagtaaccctgTTCCCTATAGTCACCATGTTTCCTATagtaaccctgttccctataataaCCCTGTTCCTTAAATAACCCGgttccctataataatcctgttccctataataaccctgttccctatagtaaccctgttccctataataaccctgttccctataataaCCCGGTTCCCTATAATAACCTTGTTCCCTATAATAACCCTGTTCCTTATagtaaccctgttccctatagtaaccctgttccctataataaccctgttccctataataaccctgttctctataataaccctgttccctatagtaaccctgttccctatggtgCTGGTCATGATTAGTGCACTATAGGGCAATAGGGCCCTGGAATGCACCCATAGTAATGTTCTCTTAATACACAACGCCGTTTCTCCTTGTTTGTTCAAAAGTTTTTAAAATACATTAAAATTTGTTAACAAATTATCAAATCAACTTCTCAACATAAGATCTGTCTCAAATAGAGAGACTACAGCAAAACGATATGAAAATCAACCAAGTGAAGCTCGTGATTGTAATGGACCTTTCAACACAGTGTATTATCAATTACAgatcaatacatcaatcaataTATTAGTATAATCAGTAGCCAGATGTTGATGGTGGAGGCAGACTACAGCAGGGGAAATTATGAATAAATACAACCAGCTGGTCACTGTGGACTGGCTTCATGGTAACTGCTGATATGGGTTGGGATTAGGAGTCAACGGGTTAAAAATCACGCTTGTAGGTTAGAAGTCAGGGGTTAGagatcaggggttagaggtcaggggttagaggtcaggggttagaggtcaggggttaggttTCAAGGGGTTAAAAATCAGGCTTGTAGTTTAGAggacaggggttagaggtcaggggttagaggccaGGGGTTAAAAATCATGGTTGTAGGTTAGGGGTTAAATGTCACTTCTCCAGTCTCTTGGCCACATCCAGGTAAGCCATCTCTATCTCGTTGTCGGCAGCGCAGGTGTTGGTGAACTCGTCTCGTGTGTAGGCATTCTTCAGATAGCGCCACACCCCACCCAGCTCTGACGGAATCTCATAGTTACGATACTTCTTAGCAACCACCTGGtaacaaaacacagagagaacacacctcACACTCAGGTAATAG
>TU403396
ATCTGTGAAAATATGATTTTATTTCCTAGCGGTCCACTCTAAACATGGCTCTTCTTTCAGATCACATGACCATCCAAACCACACCAGAACACTATGGGTCAGAACAGGAAGCACACAGGTTATAGACAGGAAGTCAGCCAAAGACCACGAGACAGAGACTGATGACTGTTTTACCCTgaatggacaataaagttttaGAATCTGAACTCGCTGCGTGGAACATGTGTCTGCGTTCCAGGCTGACTACATTACAGATGCCTGCCAGACTTTAACCACTCTAGGGTGGATCTGGTAGATTGTCATCGCCCAGGCCTGAATGGTCTCTACATAAATATTCTCTGAATCTAAAGTCATCTCTGTTGACTCCATATTAAACCGACATGACGGACACGTTCTAACAACTGATAGCTAGAGGCTAAATATTCTAAACACCTGTCCGTATGACAAACGTTTAGGATTTAATTTAATAAAGAATGTTATTATCATGTTAATCAATCCATTTTTACTTGGCTTGGAATTTGGACATTTCCAAATAGGCACATGGTTCAGGATGAGATCCATTCTAGAACTAGTTCTGATGAACAATCAAAGTTAAACAATAGCAACAACGTAGCAACAGGTTTATTCAGGAGAACCAACCAGAAGAGAGCTTTGTTCCAGGCTTCTATCAGAGGCCAAACACAGTATAAAGTGCTTCCCTATAaaaaccctgttccctataataaccctgttccctatagtcACCATGTTCCCTATagtaaccctgttccctataataaCCCTGTTCCTTAAATAACCCGGTTCCCTATaataaccctgttccctataataaccctgttccctataataaccctgttccctataataaccctgttccctatagtaaccctgttccctataataatcctgttccctataataaccctgttccctatagtaaccctgttccctataataaccctgttccctataataaCCCGGTTCCCTATAATAACCTTGTTCCCTATAATAACCCTGTTCCTTATagtaaccctgttccctatagtaaccctgttccctataataaccctgttccctataataaccctgttctctataataaccctgttccctatagtaaccctgttccctatggtgCTGGTCATGATTAGTGCACTATAGGGCAATAGGGCCCTGGAATGCACCCATAGTAATGTTCTCTTAATACACAACGCCGTTTCTCCTTGTTTGTTCAAAAGTTTTTAAAATACATTAAAATTTGTTAACAAATTATCAAATCAACTTCTCAACATAAGATCTGTCTCAAATAGAGAGACTACAGCAAAACGATATGAAAATCAACCAAGTGAAGCTCGTGATTGTAATGGACCTTTCAACACAGTGTATTATCAATTACAgatcaatacatcaatcaataTATTAGTATAATCAGTAGCCAGATGTTGATGGTGGAGGCAGACTACAGCAGGGGAAATTATGAATAAATACAACCAGCTGGTCACTGTGGACTGGCTTCATGGTAACTGCTGATATGGGTTGGGATTAGGAGTCAACGGGTTAAAAATCACGCTTGTAGGTTAGAAGTCAGGGGTTAGagatcaggggttagaggtcaggggttagaggtcagggattAGAGGTCAGGGATTAGAGAtaaggggttagaggtcaggggttagaggtcaggggttaggttTCAAGGGGTTAAAAATCAGGCTTGTAGTTTAGAggacaggggttagaggtcaggggttagaggccaGGGGTTAAAAATCATGGTTGTAGGTTAGGGGTTAAATGTCACTTCTCCAGTCTCTTGGCCACATCCAGGTAAGCCATCTCTATCTCGTTGTCGGCAGCGCAGGTGTTGGTGAACTCGTCTCGTGTGTAGGCATTCTTCAGATAGCGCCACACCCCACCCAGCTCTGACGGAATCTCATAGTTACGATACTTCTTAGCAACCACCTGGtaacaaaacacagagagaacacacctcACACTCAGGTAATAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU403385 False 1706 lncRNA 0.42 2 45620266 45624004
TU403390 False 1987 TUCP 0.41 4 45620266 45624004
TU403396 True 2011 lncRNA 0.42 2 45620266 45624004

Neighbor

gene id symbol gene type direction distance location
LOC118964488 NA coding upstream 683063 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 919862 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 1283288 44309473 ~ 44336978 (+)
myb myb coding upstream 1509998 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 1851283 43740263 ~ 43768983 (+)
LOC110510408 hmgn3 coding downstream 109638 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 922743 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 951169 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 1070884 46694888 ~ 46745644 (+)
G355704 NA non-coding upstream 127866 45460344 ~ 45492400 (+)
G355676 NA non-coding upstream 263585 45356238 ~ 45356681 (+)
G355487 NA non-coding upstream 557647 45061767 ~ 45062619 (+)
G355458 NA non-coding upstream 566917 45052925 ~ 45053349 (+)
G355480 NA non-coding upstream 576566 45042806 ~ 45043700 (+)
G355755 NA non-coding downstream 2762 45626766 ~ 45627418 (+)
G355763 enpp5 non-coding downstream 16499 45640503 ~ 45698847 (+)
G355769 NA non-coding downstream 21145 45645149 ~ 45645566 (+)
G355776 NA non-coding downstream 32103 45656107 ~ 45656994 (+)
G355780 NA non-coding downstream 40746 45664750 ~ 45666148 (+)
G355488 NA other upstream 556240 45063613 ~ 45064026 (+)
G355413 NA other upstream 644437 44975036 ~ 44975829 (+)
G354819 NA other upstream 1158275 44459693 ~ 44461991 (+)
G354630 NA other upstream 1629627 43990123 ~ 43990639 (+)
G356586 hadhb other downstream 742222 46366226 ~ 46388253 (+)
G356693 NA other downstream 947551 46571555 ~ 46572865 (+)
G356688 NA other downstream 996797 46620801 ~ 46625417 (+)

Expression


Co-expression Network