G355780


Basic Information

Item Value
gene id G355780
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 45664750 ~ 45666148 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU403443
GTCTAAAAAGGAAGCATGAGAATTCCTGATTGACCATACTGCCATGACTATATACTGAAAAAACAAGATGGATGAGAGCTTCCCTTGTGGTGCAGAGGGTAAAAGACCAAAGATTGCAGGTTCAAACACGACTTGTGAAGGGTAAAAAATATGGCTGTTTGTACGATTAAATGCTGTTCATATGTCCTACGAATAAAATTAAAATGGCATGTGTCTCTACATCACCTACAAAAATGAATATCTGTTAAATCTGAaaggaaacataatggggatgtattccaatCTGAaaggaaacataatggggatgtattacaatctggagggaaacataatggggatgtattgcAGTCgatagaaacataatggggatgcattccagtctatagaaacataatggggatgtattccagtctgtagaaacataatggggatgtattccagtctatagaaacataatggggatgtattccagtctggagggaaacataatggggatgtattatattctggagggaaacataatggggatgcaTTCCaatctggagggaaacataatggggatgtattccaatctggagggaaacataatggggatgaaTTCTaatctggagggaaacataatggggatgtattctaatctggagggaaacataatggggatctATTCCAGTCtgtagaaacataatggggatgtattccaatctggagggaaacataatggggatgtattccaatCTGTAGAAACATAATGGAgatgtattccagtctggagggaaacataatggggatgtattccagtctatagaaacataatggagatgtattccagtctggagggaaacataatggagatgtattccagtctggagggaaacataatggagatgtattccagtctggagggaaacataatggggatgtattccagtctatagaaacataatggggatgtattccagtctgtagaaacataatggggatgtattccagtctatagaaacataatggggatg

Function

NR:

description
PREDICTED: enamelin-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU403443 True 1013 lncRNA 0.39 4 45664750 45666148

Neighbor

gene id symbol gene type direction distance location
LOC118964488 NA coding upstream 727547 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 964346 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 1327772 44309473 ~ 44336978 (+)
myb myb coding upstream 1554482 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 1895767 43740263 ~ 43768983 (+)
LOC110510408 hmgn3 coding downstream 67494 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 880599 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 909025 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 1028740 46694888 ~ 46745644 (+)
G355776 NA non-coding upstream 7756 45656107 ~ 45656994 (+)
G355769 NA non-coding upstream 19184 45645149 ~ 45645566 (+)
G355755 NA non-coding upstream 37332 45626766 ~ 45627418 (+)
G355753 NA non-coding upstream 40746 45620266 ~ 45624004 (+)
G355704 NA non-coding upstream 172350 45460344 ~ 45492400 (+)
G355781 NA non-coding downstream 262 45666410 ~ 45668139 (+)
G355765 enpp5 non-coding downstream 34440 45700588 ~ 45703629 (+)
G355787 NA non-coding downstream 39700 45705848 ~ 45709210 (+)
G356038 NA non-coding downstream 50673 45716821 ~ 45717041 (+)
G356039 NA non-coding downstream 51389 45717537 ~ 45717778 (+)
G355488 NA other upstream 600724 45063613 ~ 45064026 (+)
G355413 NA other upstream 688921 44975036 ~ 44975829 (+)
G354819 NA other upstream 1202759 44459693 ~ 44461991 (+)
G355763 enpp5 other downstream 23287 45640503 ~ 45698847 (+)
G356586 hadhb other downstream 700078 46366226 ~ 46388253 (+)
G356693 NA other downstream 905407 46571555 ~ 46572865 (+)
G356688 NA other downstream 954653 46620801 ~ 46625417 (+)

Expression


Co-expression Network