G355781


Basic Information

Item Value
gene id G355781
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 45666410 ~ 45668139 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU403445
aacataatggggatgtattccagtctggagggaaacataatggggatgtattctaATCTgaagggaaacataatggggatgtattccagtctgtataaacataatggggatgtattccagtctgtagaaacataatggggatgtattccagtctgtagaaacataatggggatgtattccagtctggagggaaacataatggggatgtattctaATCTgaagggaaacataatggggatgtattccagtctatagaaacataatggggatgtattccagtctgtagaaacataatggggatgtattccagtctatagaaacataacagggatgtattccagtctggagggaaacataatggggatgcattccagtctatagaaacataatggggatgtattccagtctggagggaaacataatggggatgtattccagtctatagaaacataatggggatgtattctaATCTgaagggaaacataatggggatgcattccagtctatagaaacataatggggatgtattctaatctggagggaaacataatggggatgtattccagtctatagaaacataatggggatgtattccagtctatagaaacataatggggatgtattccagtctatagaaacataatggggatgtattctaatctggagggaaacataatggggatgtattccagtctggagggaaacataatggggatgtattccagtctatagaaacataatggggatgtattccagtctatagaaacataatggggatgcattccagtc
>TU403446
aacataatggggatgtattccagtctggagggaaacataatggggatgtattctaATCTgaagggaaacataatggggatgtattccagtctgtataaacataatggggatgtattccagtctgtagaaacataatggggatgtattccagtctgtagaaacataatggggatgtattccagtctggagggaaacataatggggatgtattctaATCTgaagggaaacataatggggatgtattccagtctatagaaacataatggggatgtattccagtctgtagaaacataatggggatgtattccagtctatagaaacataacagggatgtattccagtctggagggaaacataatggggatgcaTTCCaatctggagggaaacataatggggatgcaTTCCAGTCTGATCTTTCATGCTTTAATGAGATACAAATGTGCATGCTGGGAGTCTAGTGGTAATATTAGGTCAAACTTAAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU403445 False 789 lncRNA 0.39 4 45666410 45667582
TU403446 True 485 lncRNA 0.39 3 45666410 45668139

Neighbor

gene id symbol gene type direction distance location
LOC118964488 NA coding upstream 729207 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 966006 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 1329432 44309473 ~ 44336978 (+)
myb myb coding upstream 1556142 44084616 ~ 44110268 (+)
slc2a12 slc2a12 coding upstream 1897427 43740263 ~ 43768983 (+)
LOC110510408 hmgn3 coding downstream 65503 45733642 ~ 45752953 (+)
LOC110521126 LOC105018054 coding downstream 878608 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 907034 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 1026749 46694888 ~ 46745644 (+)
G355780 NA non-coding upstream 262 45664750 ~ 45666148 (+)
G355776 NA non-coding upstream 9416 45656107 ~ 45656994 (+)
G355769 NA non-coding upstream 20844 45645149 ~ 45645566 (+)
G355755 NA non-coding upstream 38992 45626766 ~ 45627418 (+)
G355753 NA non-coding upstream 42406 45620266 ~ 45624004 (+)
G355765 enpp5 non-coding downstream 32449 45700588 ~ 45703629 (+)
G355787 NA non-coding downstream 37709 45705848 ~ 45709210 (+)
G356038 NA non-coding downstream 48682 45716821 ~ 45717041 (+)
G356039 NA non-coding downstream 49398 45717537 ~ 45717778 (+)
G356069 NA non-coding downstream 87508 45755647 ~ 45804247 (+)
G355488 NA other upstream 602384 45063613 ~ 45064026 (+)
G355413 NA other upstream 690581 44975036 ~ 44975829 (+)
G354819 NA other upstream 1204419 44459693 ~ 44461991 (+)
G355763 enpp5 other downstream 21296 45640503 ~ 45698847 (+)
G356586 hadhb other downstream 698087 46366226 ~ 46388253 (+)
G356693 NA other downstream 903416 46571555 ~ 46572865 (+)
G356688 NA other downstream 952662 46620801 ~ 46625417 (+)

Expression


Co-expression Network