G356079


Basic Information

Item Value
gene id G356079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 45812623 ~ 45813742 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU403903
GGCGAAGCCCTCACCGATCCAGTACCGCAGGGTTAATGCCTCCACAGGTGGAACAATACCACAGCAAAATATAAGAAACCGTTTGGAACACCAGACCCTAACCACTACCACTCTGAAAAAAACGGGAcaacctggtctcaccaacccAAGACCCACAAGAACCAATGTTAAAGGAACTCTCCCAAGATAGAGGCCCAACCCTACCACACCCGATGGCCCACTTCCACCATACAACTCACCAAGCTACCGGGTGGTAACCCACATCCAGAAGAGACTACGGCCAAAATAACTACTCCCTCTTCACACACCGATCCTGGCCTCCCAAAGACCACAACAAAGGAACCAAAGAATCTCTCCGGGACCCACGGACGGACCTCCCAAACCCCTCAAGGACCAACACCACTTCCCACGGGAACCGATGTCAAAAGAACTCTCCCTAGTAGCGGATCAACCCCACCATACCTGATGGCCTACCCCCACCATACAACTCACCCAGCTTCCGAGTGGCTACTCgcatccccccaaaaaatgatgtcTCAAATCCAAAAaactactccctctccacacCCCCATCCTGGCATTCAGAAGGAACAAAAATCGTAAGGATTCCTTAATCAACAGCCACTTCCAAAAATAACAACCACAACGAAGAACTCAAAAAATACAACCGAGACTCACGAACCTAGGATGGACCTCCCAAAAATAACCCTCCAggaccaacaccactaccacggGCTGGACCACCACTGAGGCTTCCAGTACAGCGGAGGAACATCTGGACATacactgcacctgcaccttacacaccccacatcccatacaaaaaacagggggtcattaagaccacaaaaaCAGACTTCcaatagcaccatagagttaccatgaccatggactctCAATATAACTTTCCTGTAGCTACTTTActagcaccatagagttaccatgaccatGGACTCTCAATAATACTTTCCTTGAGCCACTTTACTAAACACTATAGAGTTACCGTGACCACGgactctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU403903 True 1058 lncRNA 0.47 2 45812623 45813742

Neighbor

gene id symbol gene type direction distance location
LOC110510408 hmgn3 coding upstream 59670 45733642 ~ 45752953 (+)
LOC118964488 NA coding upstream 875420 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 1112219 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 1475645 44309473 ~ 44336978 (+)
myb myb coding upstream 1702355 44084616 ~ 44110268 (+)
LOC110521126 LOC105018054 coding downstream 733005 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 761431 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 881146 46694888 ~ 46745644 (+)
G356069 NA non-coding upstream 8376 45755647 ~ 45804247 (+)
G356039 NA non-coding upstream 94845 45717537 ~ 45717778 (+)
G356038 NA non-coding upstream 95582 45716821 ~ 45717041 (+)
G355787 NA non-coding upstream 103413 45705848 ~ 45709210 (+)
G355765 enpp5 non-coding upstream 108994 45700588 ~ 45703629 (+)
G356080 NA non-coding downstream 7052 45820794 ~ 45845094 (+)
G356090 NA non-coding downstream 47109 45860851 ~ 45862045 (+)
G356127 NA non-coding downstream 101795 45915537 ~ 45916115 (+)
G356138 NA non-coding downstream 118437 45932179 ~ 45932509 (+)
G356202 NA non-coding downstream 203842 46017584 ~ 46018304 (+)
G355763 enpp5 other upstream 113776 45640503 ~ 45698847 (+)
G355753 NA other upstream 188619 45620266 ~ 45624004 (+)
G355488 NA other upstream 748597 45063613 ~ 45064026 (+)
G355413 NA other upstream 836794 44975036 ~ 44975829 (+)
G356586 hadhb other downstream 552484 46366226 ~ 46388253 (+)
G356693 NA other downstream 757813 46571555 ~ 46572865 (+)
G356688 NA other downstream 807059 46620801 ~ 46625417 (+)
G356728 NA other downstream 837343 46651085 ~ 46651564 (+)
G356789 NA other downstream 970538 46784280 ~ 46784753 (+)

Expression


Co-expression Network