G356090


Basic Information

Item Value
gene id G356090
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 45860851 ~ 45862045 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU403920
TCAAAGAGCTTGTATCATAATTGTAGTTCTGGGGAGTGTACAAAGATAGACATGCACAACAAAATGTTTCCATGGCAACTGAATAGTCACCTTTACAAAATGGCAGAGTCTCAGAAATCtggactcacacacacgcacgcacacacaggcacacacacaagcacaggcacatgaacacacacacacactctcaccaaCATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCCCCAACATAGTAAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCCCCAACATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCCCCAACATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGTCTCACACTCTCACCAACATAGTGAACCCAGACCCCAGTCTCTTGGTTCTAAAACGGTAAACGTAATAATGGCATTAATTGCACTGTTCAGGTGGAGACTGGAGGGAGAAcgtattgtgtgtatgtgtgcatatgtgtgtacatgtgtacccCGCTCCTCTCCCGTTGACTCCCAGATGGCGCTGACCAGAAGTCCCTGTCTCTACTTCCTGTTGTTCAGAATGAATAAATGTCTCTGTCAGTCTCCACAGAGATTAGCTCCTCCTCCCAGGGATAAAACCCTGACAAACACAGGCACAtacactgcacagcacagggaaaGGGCTACTCTGTCTTTTCAGCTTTGCCGTCTTTATTGAGCAGCTCGCTGGTTTTCCGGACAGTTCcggtcttttcagtctcctgaccaGAGGTTTTCCCAGGGTTCCCGGCGGCAGAATGTTTATCCAGGAAGTTGAGCATCTCACTAAGAACGGTCTGGAAGGTGCTGAGAGCCGCGCACACTGCCGGAGTCCCGAA

Function

NR:

description
transcription factor AP-2-delta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU403920 True 1164 lncRNA 0.49 2 45860851 45862045
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110510408 hmgn3 coding upstream 107898 45733642 ~ 45752953 (+)
LOC118964488 NA coding upstream 923648 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 1160447 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 1523873 44309473 ~ 44336978 (+)
myb myb coding upstream 1750583 44084616 ~ 44110268 (+)
LOC110521126 LOC105018054 coding downstream 684702 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 713128 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 832843 46694888 ~ 46745644 (+)
G356080 NA non-coding upstream 15757 45820794 ~ 45845094 (+)
G356079 NA non-coding upstream 47109 45812623 ~ 45813742 (+)
G356069 NA non-coding upstream 56604 45755647 ~ 45804247 (+)
G356039 NA non-coding upstream 143073 45717537 ~ 45717778 (+)
G356038 NA non-coding upstream 143810 45716821 ~ 45717041 (+)
G356127 NA non-coding downstream 53492 45915537 ~ 45916115 (+)
G356138 NA non-coding downstream 70134 45932179 ~ 45932509 (+)
G356202 NA non-coding downstream 155539 46017584 ~ 46018304 (+)
G356219 NA non-coding downstream 194751 46056796 ~ 46060036 (+)
G356220 NA non-coding downstream 195137 46057182 ~ 46058595 (+)
G355763 enpp5 other upstream 162004 45640503 ~ 45698847 (+)
G355753 NA other upstream 236847 45620266 ~ 45624004 (+)
G355488 NA other upstream 796825 45063613 ~ 45064026 (+)
G355413 NA other upstream 885022 44975036 ~ 44975829 (+)
G356586 hadhb other downstream 504181 46366226 ~ 46388253 (+)
G356693 NA other downstream 709510 46571555 ~ 46572865 (+)
G356688 NA other downstream 758756 46620801 ~ 46625417 (+)
G356728 NA other downstream 789040 46651085 ~ 46651564 (+)
G356789 NA other downstream 922235 46784280 ~ 46784753 (+)

Expression

G356090 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G356090 Expression in each Bioproject

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G356090 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
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Co-expression Network