G356220


Basic Information

Item Value
gene id G356220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 46057182 ~ 46058595 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU404057
ggttaggtttagaaaAGGGATGATATAAACTACGAGAtgataaatctctctctctccatctctcgttggGTTTGGGGTAGGTTTAGAAAAGGGATGATACAAACTACAAGATGTtaaatctctctccatctctcgttgggtttgggttaggtttaTAAAAGGGTTGATATAAACTACAAgatgttaaatctctctctctctctccatctctcgttggGATTGGGTTAGGTTTCGAAAAGGGATGATACAAACTACAAgatgttaaatctctctctctctttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU404057 True 282 lncRNA 0.38 2 46057182 46058595

Neighbor

gene id symbol gene type direction distance location
LOC110510408 hmgn3 coding upstream 304229 45733642 ~ 45752953 (+)
LOC118964488 NA coding upstream 1119979 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 1356778 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 1720204 44309473 ~ 44336978 (+)
myb myb coding upstream 1946914 44084616 ~ 44110268 (+)
LOC110521126 LOC105018054 coding downstream 488152 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 516578 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 636293 46694888 ~ 46745644 (+)
G356202 NA non-coding upstream 38878 46017584 ~ 46018304 (+)
G356138 NA non-coding upstream 124673 45932179 ~ 45932509 (+)
G356127 NA non-coding upstream 141067 45915537 ~ 45916115 (+)
G356090 NA non-coding upstream 195137 45860851 ~ 45862045 (+)
G356080 NA non-coding upstream 212088 45820794 ~ 45845094 (+)
G356224 NA non-coding downstream 4618 46063213 ~ 46081563 (+)
G356232 NA non-coding downstream 37230 46095825 ~ 46103709 (+)
G356290 NA non-coding downstream 124476 46183071 ~ 46183673 (+)
G356291 NA non-coding downstream 125267 46183862 ~ 46245897 (+)
G356586 hadhb non-coding downstream 307631 46366226 ~ 46388253 (+)
G355763 enpp5 other upstream 358335 45640503 ~ 45698847 (+)
G355753 NA other upstream 433178 45620266 ~ 45624004 (+)
G355488 NA other upstream 993156 45063613 ~ 45064026 (+)
G355413 NA other upstream 1081353 44975036 ~ 44975829 (+)
G356693 NA other downstream 512960 46571555 ~ 46572865 (+)
G356688 NA other downstream 562206 46620801 ~ 46625417 (+)
G356728 NA other downstream 592490 46651085 ~ 46651564 (+)
G356789 NA other downstream 725685 46784280 ~ 46784753 (+)

Expression


Co-expression Network