G356589 (garem2)


Basic Information

Item Value
gene id G356589
gene name garem2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 46396569 ~ 46400606 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU404488
CCAGAGGTTAGTTAACTCTACAGTTTGTAGTTACTGCAGGGCCACAACCAGAGGTTAGTTAACTCTACAGTTTGTAGTTACTGCAGGGCCTGTTcagttgcagatagaaatgccatgAACAGAGTTGATGTTATTCCTTATTCTACACGTCAAAGGCATATTTGGTCTACAAAAGGCTATTTCTATCTAAAGAATCCAAAACGTTGCATAACAAACACCATGGGCCCATACTGGCAAACATTAGAAAAAGTTTAAGTTCAAGGTTAAGTTTAAGCATCAGCCAATTAAAATGGTTGATGTAGTGTCATGTGACAGAATGCTAAATTGTAGCTGGtcccatcagataacctggcacaCATTAGCCCTTTGCTAACCTTACCAGGTGGCAGATTATTTCCTGGAACAAATTCCTAATCAGCCTATTAAAGACtttagggctggattcaatcagATCCGCATAGCGATTATTTTGAGGTGTTCGAAGGTAgaactgcgttagagctgtcaaatccaggCTATTGGGCAACACAAACACTTTTTACAGAAATCTCCTCGCTATTCAGATTCAATAAATTAGTCTGTCAATTTGAACTAAGCAAGCTTCTGTAGTAAATTGTTCATTTTACATCTTGCCTAGTCTACTGTAGCCTATCTAACAGGCCTATCAGGAGTTATAGGCTACCTGCATCTAGCTAAGCAAACCATGGCAAAGTTGAATTACAATCATAAACCCAGATTGTAtttagtagcctaggcctattgAAATGACAAATCAATCCTACAGACAGGCCTAGCTATAGCTATTATCCACATATAACATATAAAATAAGGCTCAATTGACAGAATATATGTGTTTTTACAATCCAAGTGTTTCTTGCGGAGAGATGTTGATATTCTCTGTCCAACTTCATCACTCAAACTCTCCCGTCTGACCACATTTCGCTACAAATTACATCGCCATTCCTTCTTAATTCACTCAATAACGTTAAGGAAGGGTTAACGATCGCAAGAGCAGCTTGTCACCGATTTGATGACTCCAACGATCTGATTGAATCGAGACCTTAAACTTGTGCTCTTTCTGTAATAGGTTGACTGTCCAGCAGGGGGATACATGTTCACCTTGAAATATGGAGATTTAAATGCTCTGCACACTTCACTAATCACCCTCCAAGTGGCAGTATATCTCTCCTCCAATcaatttttacctttatttaactaggcaagttagttaagaacaaattcttattttcaatgacggcctaggatcagtgggttaactacctgttcaggggcagaacgacagatttgtaccttgtcagctcggggatttgaacttgcaaccttccggttactagtccaatgctctaaccactaggctaccctgctgccccaagaAGAATAGCGAAGGCACACCTTCCGGTTCATCCAATCGGAAGGTACACAGCATCTGATTCAACCAATAAGAAGGGACATGTAAGATGGCTAACCTAACGTTGCAGGAGGAAAATAAATGCCTAAGCGGTGTTTCCTTCTTTCTGGTCCTGACGAGAAAAACATTTTTACTGTCGAGGGGGTTCTCTTCTGTACTGTTCAAACAatcaagtcaatgtggaggaggagttaagatggagtgtcgcCTTGTTAACGTCCTAAAGTGGAAGTCATGTCACAGGCTGCCCACTGAGGAAGCTGCCCACTGAGGGTGACCACAGCGAACAGACAGAAAGTACAGGGTGTGTTCATGGGTGTGCTACTTTTGCAAATAGGGGACGCTCAGTTCTCATCTGGGCTAAGTTGGCACTCCTGGTCCGCTGAAAAATGACGGCAAAGCCGCCTGGTAGAGTAGACGGCAAGGCCGCCTGGTGGAGTAGACGACATGGTGGAGTAGACGACAAGGTGGAGTAGACGACAAGGCCGCCTGGTGGAGTAGACGGCAAGGCCGCCTGGTGGAGTAGACGACATGGTGGAGTAGACGACAAGGTGGAGTAGACGGCAAGGCCGCCTGGTGGAGTAGACGACATGGTGGAGTAGACGACAAGGCCGCCTGGTGGAGTAGACGGCAAGGCCGCCTGGTGGAGTAGACGACAAGGCCGCCTGGTGGAGTAGACGGCAAGGCCGCCTGGTGGAGTAGACGACAAGGCCGCCTGGTGGAGTAGACGGCAAGGCCGCCTGGTGGAGTCGAAAGACAATCCAACACAGATGGAATAGTGAGAAACTATTTATTGATCTGACAATTTCCTAATCTGTAGTTTTTATCTGTAGTGTTTATCTGTAGTGTTTCAGTTAGGGGCAACCTTCGCCTCGAGCGGCTTTACAGTACTTCATCAAAATAGCAAACCTTGCCTTCGTCCTTTACGTATAtcgcacaggaggttggtggcaccgtaatcggggaggatgggctcgtggtaaagGCTGGAGTGGAATGCTATCAAGTacgtcaaacacatggtttccattccagccatttttatgagccgtcctccaatCAGCAGCTTCCAATGTTGTGataaacaccttgtgacagtgtCACAATAGGTGTTAAATCTTGGGCCTCCAACCCTGTATGAACTGTGTGATCTTGGTGACGTGCAATCGGCTGAGATGGAAGTCATGTGACAGGGTCTCCTCGTCGAGCTGAACCAGGAGGCTACCGTCAACGCGCTCTCTCTGGAACACGCCCACCGCTGCCTCTGATAGGCCAATGAACCTCAGACTGGCAGACACCTCCTccaatgagagggcagacaggTCAGTGGGCGGGCGCCAGGCAGGGTCACTAGGCGGAGTCGACCCCTCACATGTCCCGCCTCCCTCGGCGCCTCTGGAGAGCTCTGCTGTCTGATTGGCTGGTATAGGCTCTGGGgaagggcagggggagagacTAGGGCGGTTAAAGGGGTTAAGTGCTCCGAAGGGAGCGAATCGACTCTGAGGGGGCGGAAGCCTCAGccgggagaaggaggaggaattATAGCTCCACGGCTCCACCCAGGTGGCCTGCGCTGGCTGGGGATTGGCCAAGCTGTCAGCAGGGAGAGCAGGGATTGGCTCAGGGCTGATGTGGGAGGGGTCAGTCCAGGAACATggataacagtagatagatgagtctggagga

Function

symbol description
garem2 Orthologous to human GAREM2 (GRB2 associated regulator of MAPK1 subtype 2).

NR:

description
GRB2-associated and regulator of MAPK protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU404488 True 3118 lncRNA 0.48 4 46396569 46400606

Neighbor

gene id symbol gene type direction distance location
LOC110510408 hmgn3 coding upstream 643616 45733642 ~ 45752953 (+)
LOC118964488 NA coding upstream 1459366 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 1696165 44401316 ~ 44700404 (+)
ppp1r14c ppp1r14c coding upstream 2059591 44309473 ~ 44336978 (+)
myb myb coding upstream 2286301 44084616 ~ 44110268 (+)
LOC110521126 LOC105018054 coding downstream 146141 46546747 ~ 46575079 (+)
mapre3b LOC106591799 coding downstream 174567 46575173 ~ 46607810 (+)
agbl5 LOC106608376 coding downstream 294282 46694888 ~ 46745644 (+)
G356588 NA non-coding upstream 1398 46394533 ~ 46395171 (+)
G356586 hadhb non-coding upstream 8316 46366226 ~ 46388253 (+)
G356606 NA non-coding upstream 25058 46371130 ~ 46371511 (+)
G356291 NA non-coding upstream 150672 46183862 ~ 46245897 (+)
G356290 NA non-coding upstream 212896 46183071 ~ 46183673 (+)
G356617 NA non-coding downstream 15084 46415690 ~ 46416007 (+)
G356628 NA non-coding downstream 32375 46432981 ~ 46433363 (+)
G356621 NA non-coding downstream 72989 46473595 ~ 46476951 (+)
G356702 NA non-coding downstream 191349 46591955 ~ 46592330 (+)
G355763 enpp5 other upstream 697722 45640503 ~ 45698847 (+)
G355753 NA other upstream 772565 45620266 ~ 45624004 (+)
G355488 NA other upstream 1332543 45063613 ~ 45064026 (+)
G356693 NA other downstream 170949 46571555 ~ 46572865 (+)
G356688 NA other downstream 220195 46620801 ~ 46625417 (+)
G356728 NA other downstream 250479 46651085 ~ 46651564 (+)
G356789 NA other downstream 383674 46784280 ~ 46784753 (+)

Expression


Co-expression Network