G356688


Basic Information

Item Value
gene id G356688
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 46620801 ~ 46625417 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU404621
gGGGCTGGAGTCTTTATTAGAAATCATTTACATATGTATAAAGTAACAAATTAACAACAAAAACCCTGACATAAATCAGTCGTaacagggagaaaggggaggggggatTAGGACAGAGGTCAATCATCACCCCAACGCACAGAACATCATCAGCCTTCAAGTAAACAGAGCGAagcagcagtagtccagtctcaGTGTTTATTAGCTCAGTGGGTTAGCACTgtcaggggaggaggagagagacagggacgaggagagagaccaagggagagagaccgaggagaccgagagacaagagagagaccgaggagacagagagacaagagagagaccgaggagacagagagacaagagagagaccgaggagacagagagacgagagaccgaggagacagagagacaagagagaccgaggagacagagagacaagagagaccgaggagacagagagacaaaagagaccgaggagacagagagacaaaagagaccgaggagacagagagacaagcgagagacaagagagagaccgaggagaccgaggagacagagagacgagagagacagagagacgagagagacagagagacgagagagacaagagagagacagagagacaagagagagaccgagagaggaagagagacaagagagagaccgagagaggagagagacaagagagagacagagaggagagagacaagagagagacagagaggagagagacagagaggagagagacaagagagagaccgaggagagagaccgaggagagagacaagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagacacaagagagagaccgaggagagacacaagagagagaccgaggagagagacaagagagagaccgatgagagaccgaggagagagaccgaggagagagacaagagagagaccgaggagagagaccgaggagagagacaagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagaccgaggagagagaccgaggagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagacaggagagagaccgatgagacaggagagagaccagagagaccgaggagagagacgagagagagaccgagaagagagacaagagagagacgacagaaagagactgtTTGATTTCAGGAGCAAGACACCCTCCCCCTAACAGAGCTCCTGTATTTATAAACATGAATAACCAGTTTAGGACCCTGAATACAGCGCTAATAACCCTCCCTCAAATAAACAATAACATGTTTATAAATCAGTCTTTATAGAAAAGAGAGGAATGGGAtctcagagagaggagggggagagagagggggaggggatccCAGAGAGAGATTGACGTTTTGGTAGAAATATTTACTATAAGCTAGAGACGGgacagagaggatgagggggagatagaggagaacagacagagggagaggatctgAGAAACGGCTGAGAGAGATAGAtctgtttgtgtctgtaaaatgtattatgcaagaaatggcggtggaaatgaCTTAATATGCAAAtactgatataataaccatcatatggaAGTAAAGTTGGAGTCAcgtgatatggtgtgtggtcctcccacttcgactcaggaaaccatgccgTTTATGAGGCTACACATGAAATAAGTTAccatgaacttcacagggtggtgaaagtgcactgggatcttgatgctcctttacaataaaagtggtgacatgatgatcgatgcttgactgttGTTTGACGAATAcctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCtctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCTCTCTTAACCATAATAATGTCCTCGTATAGACTAGCCTACCAGCTCTCTTAACCATAATAATGTCCTCGTATAGACTAGCCTACCAGCtctctcttatccataataatgtcttcgtgtagactagcctaccagctctctcttatccataataatgtcctcatgtagactagcctaccagcTCTCTCTTAACCATAGTAATGTCCtcgtgtagactagcctaccagctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCTCTCTCTTAACCATAATAATGTCCTtgtgtagactagcctaccagctctctcttatccataataatgtcctcgtgtagactagcctaccagcgccctctcttatccataataatgtcctcgtgtagactagcctaccagcgctcgctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCtctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCGCtctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcGCTCTCTCTTAACCATAATAATGTCCtcgtgtagactagcctaccagcgctctctgccagctgttggctagagcgcacatgACAAGACCACAGTGGACATCTGCTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTG
>TU404623
gGGGCTGGAGTCTTTATTAGAAATCATTTACATATGTATAAAGTAACAAATTAACAACAAAAACCCTGACATAAATCAGTCGTaacagggagaaaggggaggggggatTAGGACAGAGGTCAATCATCACCCCAACGCACAGAACATCATCAGCCTTCAAGTAAACAGAGCGAagcagcagtagtccagtctcaGTGTTTATTAGCTCAGTGGGTTAGCACTgtcaggggaggaggagagagacagggacgaggagagagaccaagggagagagaccgaggagaccgagagacaagagagagaccgaggagacagagagacaagagagaccgaggagacagagagacaagagagaccgaggagacagagagacaaaagagaccgaggagacagagagacaaaagagaccgaggagacagagagacaagcgagagacaagagagagaccgaggagaccgaggagacagagagacgagagagacgagagacaagagagagacagagagacaagagagagaccgagagaggaagagagacaagagagagaccgagagaggagagagacaagagagagacagagaggagagagacaagagagagacagagaggagagagacagagaggagagagacaagagagagaccgaggagagagaccgaggagagagacaagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagacacaagagagagaccgaggagagacacaagagagagaccgaggagagagacaagagagagaccgatgagagaccgaggagagagaccgaggagagagacaagagagagaccgaggagagagaccgaggagagagacaagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagaccgaggagagagaccgaggagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagacaggagagagaccgatgagacaggagagagaccagagagaccgaggagagagacgagagagagaccgagaagagagacaagagagagacgacagaaagagaccgaggagagagacagaaagagactgtTTGATTTCAGGAGCAAGACACCCTCCCCCTAACAGAGCTCCTGTATTTATAAACATGAATAACCAGTTTAGGACCCTGAATACAGCGCTAATAACCCTCCCTCAAATAAACAATAACATGTTTATAAATCAGTCTTTATAGAAAAGAGAGGAATGGGAtctcagagagaggagggggagagagagggggaggggatccCAGAGAGAGATTGACGTTTTGGTAGAAATATTTACTATAAGCTAGAGACGGgacagagaggatgagggggagatagaggagaacagacagagggagaggatctgAGAAACGGCTGAGAGAGATAGAtctgtttgtgtctgtaaaatgtattatgcaagaaatggcggtggaaatgaCTTAATATGCAAAtactgatataataaccatcatatggaAGTAAAGTTGGAGTCAcgtgatatggtgtgtggtcctcccacttcgactcaggaaaccatgccgTTTATGAGGCTACACATGAAATAAGTTAccatgaacttcacagggtggtgaaagtgcactgggatcttgatgctcctttacaataaaagtggtgacatgatgatcgatgcttgactgttGTTTGACGAATAcctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCtctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCTCTCTTAACCATAATAATGTCCTCGTATAGACTAGCCTACCAGCTCTCTTAACCATAATAATGTCCTCGTATAGACTAGCCTACCAGCtctctcttatccataataatgtcttcgtgtagactagcctaccagctctctcttatccataataatgtcctcatgtagactagcctaccagcTCTCTCTTAACCATAGTAATGTCCtcgtgtagactagcctaccagctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCTCTCTCTTAACCATAATAATGTCCTtgtgtagactagcctaccagctctctcttatccataataatgtcctcgtgtagactagcctaccagcgccctctcttatccataataatgtcctcgtgtagactagcctaccagcgctcgctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCtctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCGCtctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcGCTCTCTCTTAACCATAATAATGTCCtcgtgtagactagcctaccagcgctctctgccagctgttggctagagcgcacatgACAAGACCACAGTGGACATCTGCTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACATAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACCTAGCTAGTGACAGACTGTTGGTTTTAGCCGTTGTTGGTTATTTCACTTGGTAATGTAAACACatgtcccatgccaataaagcccatgagagtcagagagagatggCTAAGGGAGGAGGCCAGAGCAACGCAAGCAAAGAGTCTCAGACTGTGTTTAAAGCGTGTATATGCAtgaagtatgtgtgtgtatcagtataaatgtgcgtgtgtgtgtgtatcagtataaatgtgcgtgtgtgtgtgtgtgtgtgtatcaggtcTGAAGCAGGTCTTGTATCCAGGTCTTGATGGCGTAGCTGGTGTCTTGTAGCAGGAGCCAGGTAGAGTTGGTCAGAGAGAGGGCGTAGGTCTGGAGACATGATACAGACACCTCCCC
>TU404624
gGGGCTGGAGTCTTTATTAGAAATCATTTACATATGTATAAAGTAACAAATTAACAACAAAAACCCTGACATAAATCAGTCGTaacagggagaaaggggaggggggatTAGGACAGAGGTCAATCATCACCCCAACGCACAGAACATCATCAGCCTTCAAGTAAACAGAGCGAagcagcagtagtccagtctcaGTGTTTATTAGCTCAGTGGGTTAGCACTgtcaggggaggaggagagagacagggacgaggagagagaccaagggagagagaccgaggagaccgagagacaagagagagaccgaggagacagagagacaagagagaccgaggagacagagagacaagagagaccgaggagacagagagacaaaagagaccgaggagacagagagacaaaagagaccgaggagacagagagacaagcgagagacaagagagagaccgaggagaccgaggagacagagagacgagagagacgagagacaagagagagacagagagacaagagagagaccgagagaggaagagagacaagagagagaccgagagaggagagagacaagagagagacagagaggagagagacaagagagagacagagaggagagagacagagaggagagagacaagagagagaccgaggagagagaccgaggagagagacaagagagaccgaggagagagacaagagagagaccgaggagagagacaagagagagaccgaggagagacacaagagagagaccgaggagagacacaagagagagaccgaggagagagacaagagagagaccgatgagagaccgaggagagagaccgaggagagagacaagagagagaccgaggagagagaccgaggagagagacaagagagaccgaggagagagacaagagagagaccgaggagagagacgagagagaccgaggagagagacaagagagagaccgaggagacaggagagagaccgatgagacaggagagagaccagagagaccgaggagagagacgagagagagaccgagaagagagacaagagagagacgacagaaagagaccgaggagagagacagaaagagactgtTTGATTTCAGGAGCAAGACACCCTCCCCCTAACAGAGCTCCTGTATTTATAAACATGAATAACCAGTTTAGGACCCTGAATACAGCGCTAATAACCCTCCCTCAAATAAACAATAACATGTTTATAAATCAGTCTTTATAGAAAAGAGAGGAATGGGAtctcagagagaggagggggagagagagggggaggggatccCAGAGAGAGATTGACGTTTTGGTAGAAATATTTACTATAAGCTAGAGACGGgacagagaggatgagggggagatagaggagaacagacagagggagaggatctgAGAAACGGCTGAGAGAGATAGAtctgtttgtgtctgtaaaatgtattatgcaagaaatggcggtggaaatgaCTTAATATGCAAAtactgatataataaccatcatatggaAGTAAAGTTGGAGTCAcgtgatatggtgtgtggtcctcccacttcgactcaggaaaccatgccgTTTATGAGGCTACACATGAAATAAGTTAccatgaacttcacagggtggtgaaagtgcactgggatcttgatgctcctttacaataaaagtggtgacatgatgatcgatgcttgactgttGTTTGACGAATAcctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCtctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCTCTCTTAACCATAATAATGTCCTCGTATAGACTAGCCTACCAGCTCTCTTAACCATAATAATGTCCTCGTATAGACTAGCCTACCAGCtctctcttatccataataatgtcttcgtgtagactagcctaccagctctctcttatccataataatgtcctcatgtagactagcctaccagcTCTCTCTTAACCATAGTAATGTCCtcgtgtagactagcctaccagctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCTCTCTCTTAACCATAATAATGTCCTtgtgtagactagcctaccagctctctcttatccataataatgtcctcgtgtagactagcctaccagcgccctctcttatccataataatgtcctcgtgtagactagcctaccagcgctcgctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCtctctcttatccataataatgtccTCGTATAGACTAGCCTACCAGCGCtctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcgctctctcttatccataataatgtcctcgtgtagactagcctaccagcGCTCTCTCTTAACCATAATAATGTCCtcgtgtagactagcctaccagcgctctctgccagctgttggctagagcgcacatgACAAGACCACAGTGGACATCTGCTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACATAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACCTAGCTAGTGACAGACTGTTGGTTTTAGCCGTTGTTGGTTATTTCACTTGGTAATGTAAACACatgtcccatgccaataaagcccatgagagtcagagagagatggCTAAGGGAGGAGGCCAGAGCAACGCAAGCAAAGAGTCTCAGACTGTGTTTAAAGCGTGTATATGCAtgaagtatgtgtgtgtatcagtataaatgtgcgtgtgtgtgtgtatcagtataaatgtgcgtgtgtgtgtgtgtgtgtgtatcaggtcTGAAGCAGGTCTTGTATCCAGGTCTTGATGGCGTAGCTGGTGTCTTGTAGCAGGAGCCAGGTAGAGTTGGTCAGAGAGAGGGCGTAGGTCTGGAGACATGATACAGACACCTCCCC
>TU404620
TATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACATAGCTAGTGACAGACTGTTGTTTATTTCACCTAGCTAGTGACAGACTGTTGGTTATTTCACCTAGCTAGTGACAGACTGTTGGTTTTAGCCGTTGTTGGTTATTTCACTTGGTAATGTAAACACatgtcccatgccaataaagcccatgagagtcagagagagatggCTAAGGGAGGAGGCCAGAGCAACGCAAGCAAAGAGTCTCAGACTGTGTTTAAAGCGTGTATATGCAtgaagtatgtgtgtgtatcagtataaatgtgcgtgtgtgtgtgtatcagtataaatgtgcgtgtgtgtgtgtgtatcaggtcTGAAGCAGGTCTTGTATCCAGGTCTTGATGGCGTAGCTGGTGTCTTGTAGCAGGAGCCAGGTAGAGTTGGTCAGAGAGAGGGCGTAGGTCTGGAGACATGATACAGACACCTCCCC

Function

NR:

description
transmembrane protein 214

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU404621 False 3133 TUCP 0.47 2 46620801 46623956
TU404623 False 3984 TUCP 0.46 7 46620801 46625417
TU404624 False 3355 lncRNA 0.46 7 46620801 46625417
TU404620 True 564 lncRNA 0.44 2 46624790 46625417

Neighbor

gene id symbol gene type direction distance location
mapre3b LOC106591799 coding upstream 12996 46575173 ~ 46607810 (+)
LOC110521126 LOC105018054 coding upstream 45722 46546747 ~ 46575079 (+)
LOC110510408 hmgn3 coding upstream 867848 45733642 ~ 45752953 (+)
LOC118964488 NA coding upstream 1683598 44933784 ~ 44937203 (+)
nbas LOC104962557 coding upstream 1920397 44401316 ~ 44700404 (+)
agbl5 LOC106608376 coding downstream 69471 46694888 ~ 46745644 (+)
G356702 NA non-coding upstream 28471 46591955 ~ 46592330 (+)
G356621 NA non-coding upstream 143850 46473595 ~ 46476951 (+)
G356628 NA non-coding upstream 187438 46432981 ~ 46433363 (+)
G356617 NA non-coding upstream 204794 46415690 ~ 46416007 (+)
G356713 NA non-coding downstream 7449 46632866 ~ 46633586 (+)
G356723 NA non-coding downstream 20100 46645517 ~ 46647811 (+)
G356733 NA non-coding downstream 38891 46664308 ~ 46738996 (+)
G356754 yo84 non-coding downstream 124705 46750122 ~ 46755469 (+)
G356795 NA non-coding downstream 176623 46802040 ~ 46802750 (+)
G356693 NA other upstream 47936 46571555 ~ 46572865 (+)
G356586 hadhb other upstream 247020 46366226 ~ 46388253 (+)
G355763 enpp5 other upstream 921954 45640503 ~ 45698847 (+)
G355753 NA other upstream 996797 45620266 ~ 45624004 (+)
G356728 NA other downstream 25668 46651085 ~ 46651564 (+)
G356789 NA other downstream 158863 46784280 ~ 46784753 (+)

Expression


Co-expression Network