Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523115 |
| gene name | LOC106572830 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 1036859 ~ 1051078 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transcription factor AP-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051608.1 | False | 2525 | mRNA | 0.49 | 3 | 1036859 | 1051078 |
| XM_036976583.1 | False | 4237 | mRNA | 0.44 | 2 | 1045266 | 1051078 |
| XR_005051605.1 | False | 3735 | mRNA | 0.44 | 3 | 1045266 | 1051078 |
| XR_005051606.1 | False | 3701 | mRNA | 0.44 | 3 | 1045266 | 1051078 |
| XR_005051607.1 | True | 3669 | mRNA | 0.44 | 3 | 1045266 | 1051078 |
1,032,000
1,034,000
1,036,000
1,038,000
1,040,000
1,042,000
1,044,000
1,046,000
1,048,000
1,048,000
1,050,000
1,052,000
1,054,000
1,056,000
1,058,000
1,060,000
1,062,000
1,064,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523114 | thap1 | coding | downstream | 21485 | 1012745 ~ 1015374 (-) |
| LOC110523113 | mob3b | coding | downstream | 31953 | 940199 ~ 1004906 (-) |
| LOC110523100 | NA | coding | downstream | 97440 | 936345 ~ 939419 (-) |
| LOC110523076 | LOC106572700 | coding | downstream | 119738 | 911435 ~ 917121 (-) |
| LOC110523091 | fsd1l | coding | downstream | 126413 | 821355 ~ 910446 (-) |
| LOC118964538 | NA | coding | upstream | 39829 | 1090907 ~ 1127618 (-) |
| LOC110523084 | rnf170 | coding | upstream | 163754 | 1214832 ~ 1221694 (-) |
| LOC110517810 | trabd2a | coding | upstream | 284589 | 1335667 ~ 1475700 (-) |
| LOC110523086 | LOC106572646 | coding | upstream | 857871 | 1908949 ~ 1910347 (-) |
| LOC118964539 | NA | coding | upstream | 958056 | 2009134 ~ 2060858 (-) |
| G357918 | NA | non-coding | downstream | 6220 | 1030406 ~ 1030639 (-) |
| G357915 | NA | non-coding | downstream | 7328 | 1023483 ~ 1029531 (-) |
| G357914 | NA | non-coding | downstream | 13675 | 1022485 ~ 1023184 (-) |
| G357912 | NA | non-coding | downstream | 14133 | 1019561 ~ 1022726 (-) |
| G357913 | NA | non-coding | downstream | 15059 | 1020874 ~ 1021800 (-) |
| G357950 | NA | non-coding | upstream | 86911 | 1137989 ~ 1138966 (-) |
| G357955 | NA | non-coding | upstream | 96086 | 1147164 ~ 1147511 (-) |
| G357965 | NA | non-coding | upstream | 111846 | 1162924 ~ 1163771 (-) |
| G357972 | NA | non-coding | upstream | 126909 | 1177987 ~ 1178449 (-) |
| G358080 | NA | non-coding | upstream | 132395 | 1183473 ~ 1186675 (-) |
| G357797 | NA | other | downstream | 218112 | 817154 ~ 818747 (-) |
| ythdc1 | ythdc1 | other | downstream | 300291 | 724581 ~ 759382 (-) |
| G357751 | NA | other | downstream | 345161 | 690811 ~ 691698 (-) |
| G357278 | NA | other | downstream | 791835 | 244749 ~ 245024 (-) |
| G357258 | NA | other | downstream | 827518 | 207105 ~ 209341 (-) |
| G358126 | NA | other | upstream | 244450 | 1295528 ~ 1298651 (-) |
| G358446 | NA | other | upstream | 793746 | 1834553 ~ 1893316 (-) |
| G359712 | NA | other | upstream | 2023467 | 3074545 ~ 3080338 (-) |
| G359752 | NA | other | upstream | 2141435 | 3192513 ~ 3193105 (-) |
| G359989 | NA | other | upstream | 2574270 | 3625348 ~ 3625776 (-) |
