LOC118964551



Basic Information


Item Value
gene id LOC118964551
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 1227617 ~ 1228033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005051620.1
tggatattaacatgttatcaacatagagagagagagaggtcatccctggatattaacatgttatcaacatagagagagagagaggtcatccctGGATATTAACATGTTATGAACATAGAGAGAGGTCATCCCTGGATATTAACGTGTtatcaacatagagagagagagaggtcatccctggagaattaacatgttatcaacatagagagagagagagagagagaggtcatccctGGATATTAACATGTTATGAACATAGAGAGAGagaggtcatccctggatattaacatgttatcaacatagagagagagagagaggtcatccctggatattaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005051620.1 True 335 mRNA 0.39 3 1227617 1228033
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110523098 NA coding upstream 491826 733011 ~ 737553 (+)
LOC110524924 ptbp3 coding upstream 628338 482425 ~ 599279 (+)
LOC110523070 inip coding upstream 811083 410761 ~ 416534 (+)
LOC110524922 LOC106572882 coding upstream 915019 296626 ~ 312598 (+)
LOC110523064 LOC106572881 coding upstream 942484 224811 ~ 285133 (+)
LOC118964548 NA coding downstream 54 1228087 ~ 1232244 (+)
LOC118964547 NA coding downstream 17968 1246001 ~ 1249676 (+)
LOC118964550 NA coding downstream 24792 1252825 ~ 1255902 (+)
LOC110523072 LOC106572640 coding downstream 481510 1709543 ~ 1828943 (+)
LOC110523096 NA coding downstream 669325 1897358 ~ 1904914 (+)
G357986 NA non-coding upstream 13123 1214021 ~ 1214494 (+)
G357984 NA non-coding upstream 14945 1212415 ~ 1212672 (+)
G357973 NA non-coding upstream 44294 1182754 ~ 1183323 (+)
G357633 NA non-coding upstream 60934 1166354 ~ 1166683 (+)
G357630 NA non-coding upstream 63846 1162936 ~ 1163771 (+)
G357999 NA non-coding downstream 6655 1234688 ~ 1235117 (+)
G358003 NA non-coding downstream 36341 1264374 ~ 1264818 (+)
G357995 NA non-coding downstream 48937 1276970 ~ 1277414 (+)
LOC110523075 hook3 non-coding downstream 68885 1221663 ~ 1298618 (+)
G358014 NA non-coding downstream 81576 1309609 ~ 1309829 (+)
G357565 NA other upstream 286876 940235 ~ 940741 (+)
G357564 NA other upstream 287744 939068 ~ 939873 (+)
G357136 NA other upstream 1025975 200717 ~ 201642 (+)
G358042 NA other downstream 160362 1388395 ~ 1390468 (+)
G358076 NA other downstream 246762 1474795 ~ 1475734 (+)
G358596 NA other downstream 818641 2046674 ~ 2047025 (+)
G359084 NA other downstream 1388845 2616878 ~ 2617330 (+)

Expression


LOC118964551 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

LOC118964551 Expression in each Bioproject

Bar chart with 13 bars.
LOC118964551 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network