Item | Value |
---|---|
gene id | LOC118964551 |
gene name | NA |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 1227617 ~ 1228033 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005051620.1 | True | 335 | mRNA | 0.39 | 3 | 1227617 | 1228033 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110523098 | NA | coding | upstream | 491826 | 733011 ~ 737553 (+) |
LOC110524924 | ptbp3 | coding | upstream | 628338 | 482425 ~ 599279 (+) |
LOC110523070 | inip | coding | upstream | 811083 | 410761 ~ 416534 (+) |
LOC110524922 | LOC106572882 | coding | upstream | 915019 | 296626 ~ 312598 (+) |
LOC110523064 | LOC106572881 | coding | upstream | 942484 | 224811 ~ 285133 (+) |
LOC118964548 | NA | coding | downstream | 54 | 1228087 ~ 1232244 (+) |
LOC118964547 | NA | coding | downstream | 17968 | 1246001 ~ 1249676 (+) |
LOC118964550 | NA | coding | downstream | 24792 | 1252825 ~ 1255902 (+) |
LOC110523072 | LOC106572640 | coding | downstream | 481510 | 1709543 ~ 1828943 (+) |
LOC110523096 | NA | coding | downstream | 669325 | 1897358 ~ 1904914 (+) |
G357986 | NA | non-coding | upstream | 13123 | 1214021 ~ 1214494 (+) |
G357984 | NA | non-coding | upstream | 14945 | 1212415 ~ 1212672 (+) |
G357973 | NA | non-coding | upstream | 44294 | 1182754 ~ 1183323 (+) |
G357633 | NA | non-coding | upstream | 60934 | 1166354 ~ 1166683 (+) |
G357630 | NA | non-coding | upstream | 63846 | 1162936 ~ 1163771 (+) |
G357999 | NA | non-coding | downstream | 6655 | 1234688 ~ 1235117 (+) |
G358003 | NA | non-coding | downstream | 36341 | 1264374 ~ 1264818 (+) |
G357995 | NA | non-coding | downstream | 48937 | 1276970 ~ 1277414 (+) |
LOC110523075 | hook3 | non-coding | downstream | 68885 | 1221663 ~ 1298618 (+) |
G358014 | NA | non-coding | downstream | 81576 | 1309609 ~ 1309829 (+) |
G357565 | NA | other | upstream | 286876 | 940235 ~ 940741 (+) |
G357564 | NA | other | upstream | 287744 | 939068 ~ 939873 (+) |
G357136 | NA | other | upstream | 1025975 | 200717 ~ 201642 (+) |
G358042 | NA | other | downstream | 160362 | 1388395 ~ 1390468 (+) |
G358076 | NA | other | downstream | 246762 | 1474795 ~ 1475734 (+) |
G358596 | NA | other | downstream | 818641 | 2046674 ~ 2047025 (+) |
G359084 | NA | other | downstream | 1388845 | 2616878 ~ 2617330 (+) |