Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523109 |
| gene name | lppr1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 3644170 ~ 3669873 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| phospholipid phosphatase-related protein type 1 |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0003824 | catalytic activity | molecular_function |
| id | description |
|---|---|
| K19581 | LPPR1_2_5; lipid phosphate phosphatase-related protein type 1/2/5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036976620.1 | True | 1973 | mRNA | 0.47 | 8 | 3644170 | 3669873 |
3,640,000
3,644,000
3,648,000
3,652,000
3,656,000
3,660,000
3,664,000
3,668,000
3,672,000
3,676,000
3,680,000
3,684,000
3,688,000
3,692,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964540 | NA | coding | downstream | 145936 | 3497350 ~ 3498234 (-) |
| lpar1 | LOC106572527 | coding | downstream | 190390 | 3392167 ~ 3453780 (-) |
| rassf6 | LOC106572546 | coding | downstream | 458961 | 3154684 ~ 3185209 (-) |
| LOC118964539 | NA | coding | downstream | 1583312 | 2009134 ~ 2060858 (-) |
| LOC110523086 | LOC106572646 | coding | downstream | 1733823 | 1908949 ~ 1910347 (-) |
| LOC110513199 | dcc | coding | upstream | 114669 | 3782114 ~ 4417531 (-) |
| fech | fech | coding | upstream | 945128 | 4615001 ~ 4638131 (-) |
| nars1 | sync | coding | upstream | 969147 | 4639020 ~ 4647952 (-) |
| LOC110524935 | rab27b | coding | upstream | 1801156 | 5471029 ~ 5564365 (-) |
| LOC110523123 | LOC106572171 | coding | upstream | 2275291 | 5945164 ~ 5954687 (-) |
| G359996 | NA | non-coding | downstream | 3539 | 3640420 ~ 3640631 (-) |
| G359929 | NA | non-coding | downstream | 52958 | 3590935 ~ 3591212 (-) |
| G359908 | NA | non-coding | downstream | 73805 | 3569316 ~ 3570365 (-) |
| G359902 | NA | non-coding | downstream | 79988 | 3563802 ~ 3564182 (-) |
| G359854 | NA | non-coding | downstream | 125905 | 3454439 ~ 3518265 (-) |
| G360011 | NA | non-coding | upstream | 23094 | 3692967 ~ 3713162 (-) |
| G360012 | NA | non-coding | upstream | 27916 | 3697789 ~ 3698970 (-) |
| G360013 | NA | non-coding | upstream | 29101 | 3698974 ~ 3702033 (-) |
| G360016 | NA | non-coding | upstream | 47306 | 3717179 ~ 3717837 (-) |
| G360346 | NA | non-coding | upstream | 79115 | 3748988 ~ 3749329 (-) |
| G359989 | NA | other | downstream | 18394 | 3625348 ~ 3625776 (-) |
| G359752 | NA | other | downstream | 451065 | 3192513 ~ 3193105 (-) |
| G359712 | NA | other | downstream | 563832 | 3074545 ~ 3080338 (-) |
| G358446 | NA | other | downstream | 1750854 | 1834553 ~ 1893316 (-) |
| G358126 | NA | other | downstream | 2345519 | 1295528 ~ 1298651 (-) |
| G360015 | NA | other | upstream | 44359 | 3714232 ~ 3715552 (-) |
| G360345 | NA | other | upstream | 78363 | 3748236 ~ 3748718 (-) |
| G360532 | NA | other | upstream | 629519 | 4299392 ~ 4300025 (-) |
| G360610 | NA | other | upstream | 880473 | 4550346 ~ 4550927 (-) |
