LOC110523129


Basic Information

Item Value
gene id LOC110523129
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 6755753 ~ 6763633 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601544.2
GGCAGTGGGCTCACTTGATTGCAGATCTGAGATATGTGTGCGTGCCGCAACAAGAGGTCATTTGGAACGCGGATGGTGGAGAAACACGCACAGCGCACGCTTGTTGGAATCCGCGCCCATAGCCTATATTCGCTCTTTCCTATCCGTGACAGAGGCTGCAAAAATGACGATCAAGAAAAGTAAAACCGTCGTTTTTGAAAGACGTGCAGGGGATTTAACTGCGTTGTATTGTATGAATGATTGGGTGGTTGCAGTGGTGTTGGCTATTATTGTTATGATGTCTGTATGGGCTGCACTCATCATATACAGatatatacagacagagagaggtaaaagAAGAAGAAAGGTTGATGACGACACTATTTTGGAAACTGAAAAGGACGAAAATGAGACGACAAACGAAGAAAAAATACTGTCCTGTGTCGAGTCAACAGAGGAGGGTGAAGACGAGACGCTGGAGAGCTGGgatggagaggaatggaggagagagccAATGGAATGGATTCCAACAACCAGTGAGAATGTAGAACCCTTTGAGGAGATCCCAACAATACCCAATGAGGATGTAGAACCCATTGAGGGGATCTCAGCAACAACCAATGAGGATATAGAACCCATTGAGGGGATACCAACAACCAATGAAGGTGTAGAACCCATTGAGGGGATCCCAACAACCAATGAGGATGTAGAAACCATTGAGGGGATCCCAACAACCAATGAGGGTGTAGAACCCATTGATGGGATCCCAACAACCAATGAGGGTGTAGAACCCATTGAGGGGATCCCAACAACCAATGAGGGTGTAGAACACATTGAGGGGATCCCGACAATAACCATTGATGAGATAGAACCCATTACAAGGATTCGAACAACAACCAATGAGGATCTAGAACCAATTAGATGGAACCGAACAGCAACCAATGAGGATCTACAACCCATTAGACGCATCCGAACACTAACCAATGAGGATCTAGAACCAATTAGACGGAACCGAACAGCAACCAATGAGGATCTACAACCCAATAGACGCATCCGAACACTAACCAATGAGGATCTAGAACCAATTAGACGGAACCGAACAGCAACCAATGAGGATCTACAACCCATTAGACGGATCCGAACAACAACCAATGAGAGCGATGGTCCTTACACGTGGGAGTCATATGCTGAGTGGCAGATTGTTGAGGAGTTTCACCTTGGCTCTCAACCTCAAGAGCACTGTGAAGGCACATGTCAGCACTATGACGGTTTATGTCAGGTCTGTGGAGGCTTGTGTCATTGCAGTGAATGCTTATGTCAGTTCTACGAAGGCTTATGTCAGGACGACGCCGAATCCCAGACTGACCGGACCGTGGGTCAAGAGGAGCAGGCTTCTACCAGTCACTATTCCCTCAGTGACATAAACTATCAATCTGGACATGAGAAGGACAAAGATGTGTATAACCAGGACGAGGAGGATTTGAAGGAAGTTGAACTGAGTGATGATTGTCAATGTGAGAGCACAGAGGAGGAGGTAAACCATCCACATGCCTTTGCCATCAAGCCTCAGAGAGATCTGGAAGAGCTCAATGAAAATCTCCCTGGCATGATATTGACTGACACTGACCTTGAAGAACCTGACCGTGTGTGTTATACAGAGATACAGGAAGTACAATACACAGATGATGACATGACCAGCCATGTTGTCTTTTACAACGAAGAGAGGCCGGAGATGACATTGACTGACACTGAACATGCGTCggataaagaaagagaggaagtagAATATCCGGATGACGATAGACACAGCCATGTTGCTTTTGCCAAAGTCCAGGAAAGTGAAAATCTACCTGATATGAAATTGACTAACACTGACCGGATAGAACCGGAACATGTGtatgaggtggagagagaggaagtagaaTATCCAGATGAGGTAATCACTGAAGGTCCAGAACACCCCAGTGAAAACATCCCAGAGATATTGAGTGACACTGACCTCCAACAACCTAGCAATTTATGTGAAGAAGAAACACAGGAAGTAGAATGTACAAGTAATTATATGGACGGCCAGGTTGCCTTTGTCAGCGACACTCAGGAACCAGAACATCCCAGTGAAAACATCCCAGAGATATTGAGTGACACTGACCTCCAACAACCTAGCAATTTATGTGAAGAAGAAACACAGGAAGTAGAATGTACAAGTGATTATATGGACAGCCAGGTTGCCTTTGTCAGCGACACTCAGGAACCAGAACATCCCAATGAATATCGACCTGACATATTGACTGACACTAAGACTAAAGAACTTGACCATGTGTGTGATTCAGAGATACAGGAAGTGGAATACCCAGGTGCTGACATGACCAGCCATGTGCCGTCAGTCTCTGATAGGACAGTAGAAGACGATATGAAAGAAGCTATGGTAGAGGATCTTGACATGGACGCTATGGTAGCGGATCTTTGGAGGAAGGACTGTCTACTTCATGACTATGTCATTGACGGGTTGAGCCAGCCAACCGATGTTAGAGACACACATGTGGCTGAGAGGAAAGCAGACATCGTTGATGATAACAGCAAGGACACgcgtgtagaggaggagaggaaaagaaagagtGATGATACACGGATAGAGGAGAGTTATGAGAAAGTTGAAATTAACATAATGGAAGCCACGATGGACTATAATGAATGGATGACAGTCAGCGGCGCAGAGGACAACAGTGACTCCCCATGGGTGAGGACAAGCCACTCGTCCATCGAATGCTCTTCTGCCGAGGCGGAGCATCATCCCACAGAAACGCATCACAATTCAGATGATCCAACGGTGGCTGACGCAACCGCATTCAAGGAGGTCGAAGAAACGGGAACTAAACCTGTATCGCCAGATGGAGACCTGCGTAGGAATAAGAAGATGACGGCTGTGCTTCCTATCGAACCCAAGACTGTACGGGTGAGGTTCTGTGTCCACTACCGTACCCAGTCTCCCTGGCAGGAGCTGGCTGTGACAGGGAACCAGCAGGAGCTGGGGAGCTGGACGGGCttcgttccactggagagagccCAGGACGGGTTCTGGGCCAGCTGGGTCGTCCTCCCCGCGGAGAAGCAGGTGGAATGGAAGTTGGTGCTGGTGGAAGATGGAGAGATCCTACGCTGGGAGGAGGGTGGTAATAGACACCTGGAGACAGGTTGGGGTGGTGGAGAGGTGTATCTCAACGAGTGGTGGGGCAGCCTCTGAGTGACAGGTTCCTACTGGGCACCAACTGGTTGGAACAACACCgttcttcacaaaaatatatatatcaatgtGATAATGTTGAATCGATGTGGAAAAATAATTTGATTTGCAAAAAACGTAAAGtaattttgacattttttaaaatattttcttacCCAATTGTTAACCGAAATCCTATAACAAACACAGTTTGCATGTTTGGAGATTtgaaaactagacgttgaaatgacacctgtgcccagtggggcagcctctctgtgcccagtggggaagCCTCTGAGTGATAAGGAGGGAATGGCACTACAATTCCCATTTCCATACTAGCATACTACTTAGAATGCATAGCCATTTTAACATTTTACTGGCGCTAGGGgtcatatatatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatacagtggggagaacaagtatttgatacactgacgattttgaaggttttcctac
>XM_036976682.1
GGCAGTGGGCTCACTTGATTGCAGATCTGAGATATGTGTGCGTGCCGCAACAAGAGGTCATTTGGAACGCGGATGGTGGAGAAACACGCACAGCGCACGCTTGTTGGAATCCGCGCCCATAGCCTATATTCGCTCTTTCCTATCCGTGACAGAGGCTGCAAAAATGACGATCAAGAAAAGTAAAACCGTCGTTTTTGAAAGACGTGCAGGGGATTTAACTGCGTTGTATTGTATGAATGATTGGGTGGTTGCAGTGGTGTTGGCTATTATTGTTATGATGTCTGTATGGGCTGCACTCATCATATACAGatatatacagacagagagaggtaaaagAAGAAGAAAGGTTGATGACGACACTATTTTGGAAACTGAAAAGGACGAAAATGAGACGACAAACGAAGAAAAAATACTGTCCTGTGTCGAGTCAACAGAGGAGGGTGAAGACGAGACGCTGGAGAGCTGGgatggagaggaatggaggagagagccAATGGAATGGATTCCAACAACCAGTGAGAATGTAGAACCCTTTGAGGAGATCCCAACAATACCCAATGAGGATGTAGAACCCATTGAGGGGATCTCAGCAACAACCAATGAGGATATAGAACCCATTGAGGGGATACCAACAACCAATGAAGGTGTAGAACCCATTGAGGGGATCCCAACAACCAATGAGGATGTAGAAACCATTGAGGGGATCCCAACAACCAATGAGGGTGTAGAACCCATTGATGGGATCCCAACAACCAATGAGGGTGTAGAACCCATTGAGGGGATCCCAACAACCAATGAGGGTGTAGAACACATTGAGGGGATCCCGACAATAACCATTGATGAGATAGAACCCATTACAAGGATTCGAACAACAACCAATGAGGATCTAGAACCAATTAGATGGAACCGAACAGCAACCAATGAGGATCTACAACCCATTAGACGCATCCGAACACTAACCAATGAGGATCTAGAACCAATTAGACGGAACCGAACAGCAACCAATGAGGATCTACAACCCAATAGACGCATCCGAACACTAACCAATGAGGATCTAGAACCAATTAGACGGAACCGAACAGCAACCAATGAGGATCTACAACCCATTAGACGGATCCGAACAACAACCAATGAGAGCGATGGTCCTTACACGTGGGAGTCATATGCTGAGTGGCAGATTGTTGAGGAGTTTCACCTTGGCTCTCAACCTCAAGAGCACTGTGAAGGCACATGTCAGCACTATGACGGTTTATGTCAGGTCTGTGGAGGCTTGTGTCATTGCAGTGAATGCTTATGTCAGTTCTACGAAGGCTTATGTCAGGACGACGCCGAATCCCAGACTGACCGGACCGTGGGTCAAGAGGAGCAGGCTTCTACCAGTCACTATTCCCTCAGTGACATAAACTATCAATCTGGACATGAGAAGGACAAAGATGTGTATAACCAGGACGAGGAGGATTTGAAGGAAGTTGAACTGAGTGATGATTGTCAATGTGAGAGCACAGAGGAGGAGGTAAACCATCCACATGCCTTTGCCATCAAGCCTCAGAGAGATCTGGAAGAGCTCAATGAAAATCTCCCTGGCATGATATTGACTGACACTGACCTTGAAGAACCTGACCGTGTGTGTTATACAGAGATACAGGAAGTACAATACACAGATGATGACATGACCAGCCATGTTGTCTTTTACAACGAAGAGAGGCCGGAGATGACATTGACTGACACTGAACATGCGTCggataaagaaagagaggaagtagAATATCCGGATGACGATAGACACAGCCATGTTGCTTTTGCCAAAGTCCAGGAAAGTGAAAATCTACCTGATATGAAATTGACTAACACTGACCGGATAGAACCGGAACATGTGtatgaggtggagagagaggaagtagaaTATCCAGATGAGGTAATCACTGAAGGTCCAGAACACCCCAGTGAAAACATCCCAGAGATATTGAGTGACACTGACCTCCAACAACCTAGCAATTTATGTGAAGAAGAAACACAGGAAGTAGAATGTACAAGTGATTATATGGACAGCCAGGTTGCCTTTGTCAGCGACACTCAGGAACCAGAACATCCCAATGAATATCGACCTGACATATTGACTGACACTAAGACTAAAGAACTTGACCATGTGTGTGATTCAGAGATACAGGAAGTGGAATACCCAGGTGCTGACATGACCAGCCATGTGCCGTCAGTCTCTGATAGGACAGTAGAAGACGATATGAAAGAAGCTATGGTAGAGGATCTTGACATGGACGCTATGGTAGCGGATCTTTGGAGGAAGGACTGTCTACTTCATGACTATGTCATTGACGGGTTGAGCCAGCCAACCGATGTTAGAGACACACATGTGGCTGAGAGGAAAGCAGACATCGTTGATGATAACAGCAAGGACACgcgtgtagaggaggagaggaaaagaaagagtGATGATACACGGATAGAGGAGAGTTATGAGAAAGTTGAAATTAACATAATGGAAGCCACGATGGACTATAATGAATGGATGACAGTCAGCGGCGCAGAGGACAACAGTGACTCCCCATGGGTGAGGACAAGCCACTCGTCCATCGAATGCTCTTCTGCCGAGGCGGAGCATCATCCCACAGAAACGCATCACAATTCAGATGATCCAACGGTGGCTGACGCAACCGCATTCAAGGAGGTCGAAGAAACGGGAACTAAACCTGTATCGCCAGATGGAGACCTGCGTAGGAATAAGAAGATGACGGCTGTGCTTCCTATCGAACCCAAGACTGTACGGGTGAGGTTCTGTGTCCACTACCGTACCCAGTCTCCCTGGCAGGAGCTGGCTGTGACAGGGAACCAGCAGGAGCTGGGGAGCTGGACGGGCttcgttccactggagagagccCAGGACGGGTTCTGGGCCAGCTGGGTCGTCCTCCCCGCGGAGAAGCAGGTGGAATGGAAGTTGGTGCTGGTGGAAGATGGAGAGATCCTACGCTGGGAGGAGGGTGGTAATAGACACCTGGAGACAGGTTGGGGTGGTGGAGAGGTGTATCTCAACGAGTGGTGGGGCAGCCTCTGAGTGACAGGTTCCTACTGGGCACCAACTGGTTGGAACAACACCgttcttcacaaaaatatatatatcaatgtGATAATGTTGAATCGATGTGGAAAAATAATTTGATTTGCAAAAAACGTAAAGtaattttgacattttttaaaatattttcttacCCAATTGTTAACCGAAATCCTATAACAAACACAGTTTGCATGTTTGGAGATTtgaaaactagacgttgaaatgacacctgtgcccagtggggcagcctctctgtgcccagtggggaagCCTCTGAGTGATAAGGAGGGAATGGCACTACAATTCCCATTTCCATACTAGCATACTACTTAGAATGCATAGCCATTTTAACATTTTACTGGCGCTAGGGgtcatatatatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatacagtggggagaacaagtatttgatacactgacgattttgaaggttttcctac

Function

NR:

description
uncharacterized protein LOC110523129

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601544.2 False 3693 mRNA 0.46 2 6755753 6763633
XM_036976682.1 True 3543 mRNA 0.47 3 6755753 6763633

Neighbor

gene id symbol gene type direction distance location
LOC110524941 LOC106572051 coding downstream 29119 6562531 ~ 6726634 (-)
LOC110523127 LOC106572117 coding downstream 245736 6505381 ~ 6510017 (-)
LOC110524940 LOC106572087 coding downstream 271463 6437266 ~ 6484290 (-)
LOC110523124 wdr7 coding downstream 318906 6093969 ~ 6436847 (-)
LOC110523123 LOC106572171 coding downstream 801066 5945164 ~ 5954687 (-)
LOC110524942 LOC106572043 coding upstream 11772 6775405 ~ 6860173 (-)
LOC110523130 ralgps1 coding upstream 104245 6867878 ~ 7163472 (-)
LOC118964555 NA coding upstream 111683 6875316 ~ 6875924 (-)
LOC110523134 zbtb43 coding upstream 424265 7187898 ~ 7194434 (-)
LOC110523135 lmx1b coding upstream 508685 7272318 ~ 7367797 (-)
G363581 NA non-coding downstream 2852 6752412 ~ 6752901 (-)
G363565 NA non-coding downstream 39447 6715889 ~ 6716306 (-)
G363559 NA non-coding downstream 61299 6693124 ~ 6694454 (-)
G363550 NA non-coding downstream 79782 6674842 ~ 6675971 (-)
G363515 NA non-coding downstream 180505 6573408 ~ 6575248 (-)
G363605 NA non-coding upstream 64444 6828077 ~ 6830288 (-)
G363586 NA non-coding upstream 101256 6864889 ~ 6867211 (-)
G363630 NA non-coding upstream 135277 6898910 ~ 6905010 (-)
G363631 NA non-coding upstream 136824 6900457 ~ 6903083 (-)
G363632 NA non-coding upstream 140872 6904505 ~ 6907292 (-)
G363470 LOC106572095 other downstream 201038 6543675 ~ 6554715 (-)
G361170 NA other downstream 1673885 5080578 ~ 5081868 (-)
G360703 NA other downstream 2016051 4738312 ~ 4739702 (-)
G364322 NA other upstream 1539634 8303267 ~ 8304183 (-)
G364754 NA other upstream 2283909 9047542 ~ 9099000 (-)
G365752 NA other upstream 2426036 9189669 ~ 9190098 (-)
G368612 ctxn3 other upstream 5370419 12134052 ~ 12136790 (-)
G368921 NA other upstream 5941933 12705566 ~ 12706092 (-)

Expression


Co-expression Network