Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964742 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 8707739 ~ 8712041 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like |
| id | name | namespace |
|---|---|---|
| GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051936.1 | True | 672 | mRNA | 0.39 | 3 | 8707739 | 8712041 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| chsy3 | chsy3 | coding | upstream | 6403 | 8517256 ~ 8701336 (+) |
| minar2 | kiaa1024l | coding | upstream | 192104 | 8510633 ~ 8515635 (+) |
| LOC110524944 | adamts19 | coding | upstream | 200109 | 8383645 ~ 8507630 (+) |
| isoc1 | isoc1 | coding | upstream | 400724 | 8290855 ~ 8307147 (+) |
| slc27a6 | slc27a6 | coding | upstream | 418482 | 8250159 ~ 8289257 (+) |
| lyrm7 | lyrm7 | coding | downstream | 57743 | 8769784 ~ 8772389 (+) |
| cdc42se2 | cdc42se2 | coding | downstream | 63093 | 8775134 ~ 8849107 (+) |
| sptlc1 | sptlc1 | coding | downstream | 169013 | 8881054 ~ 8900229 (+) |
| ror2 | ror2 | coding | downstream | 188711 | 8900752 ~ 9028540 (+) |
| trnas-uga | NA | coding | downstream | 231031 | 8943072 ~ 8943145 (+) |
| G363016 | NA | non-coding | upstream | 4563 | 8702950 ~ 8703176 (+) |
| G363008 | NA | non-coding | upstream | 23358 | 8684175 ~ 8684381 (+) |
| G363006 | NA | non-coding | upstream | 25041 | 8682461 ~ 8682698 (+) |
| G363005 | NA | non-coding | upstream | 25433 | 8682003 ~ 8682306 (+) |
| G363027 | NA | non-coding | downstream | 12902 | 8724943 ~ 8725173 (+) |
| G363042 | NA | non-coding | downstream | 34120 | 8746161 ~ 8746385 (+) |
| G363054 | hint1 | non-coding | downstream | 48790 | 8760831 ~ 8765642 (+) |
| G363108 | NA | non-coding | downstream | 121916 | 8833957 ~ 8834694 (+) |
| G362662 | NA | other | upstream | 788174 | 7918922 ~ 7919565 (+) |
| G362554 | NA | other | upstream | 1015225 | 7690440 ~ 7692514 (+) |
| G362297 | zbtb43 | other | upstream | 1517920 | 7185926 ~ 7189819 (+) |
| G361671 | NA | other | upstream | 2779813 | 5803828 ~ 5927926 (+) |
| G360985 | NA | other | upstream | 3408336 | 5296870 ~ 5299403 (+) |
| G364850 | NA | other | downstream | 516797 | 9228838 ~ 9229231 (+) |
| G365197 | NA | other | downstream | 1136662 | 9848703 ~ 9849154 (+) |
| G366748 | NA | other | downstream | 2264641 | 10976682 ~ 10977152 (+) |
| G366973 | NA | other | downstream | 2713601 | 11425642 ~ 11428710 (+) |
