Gene
RNA
| Item | Value |
|---|---|
| gene id | hint1 |
| gene name | hint1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 8760831 ~ 8765948 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| hint1 | Predicted to enable hydrolase activity. Predicted to be involved in purine ribonucleotide catabolic process. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in Gamstorp-Wohlfart syndrome. Orthologous to human HINT1 (histidine triad nucleotide binding protein 1). |
| description |
|---|
| histidine triad nucleotide-binding protein 1 |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0003824 | catalytic activity | molecular_function |
| id | description |
|---|---|
| K02503 | HINT1, hinT, hit; histidine triad (HIT) family protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021601566.2 | True | 909 | mRNA | 0.47 | 3 | 8760831 | 8765948 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523142 | LOC106571805 | coding | downstream | 531540 | 8206491 ~ 8229291 (-) |
| LOC110524943 | fbn2 | coding | downstream | 556313 | 7882389 ~ 8204518 (-) |
| LOC110523137 | pbx3 | coding | downstream | 1038704 | 7593362 ~ 7722127 (-) |
| mvb12ba | mvb12b | coding | downstream | 1323912 | 7394813 ~ 7436919 (-) |
| LOC110523135 | lmx1b | coding | downstream | 1393034 | 7272318 ~ 7367797 (-) |
| LOC110524946 | LOC106571878 | coding | upstream | 91669 | 8857617 ~ 8864575 (-) |
| syk | syk | coding | upstream | 379189 | 9145137 ~ 9199533 (-) |
| LOC110523157 | lyz2 | coding | upstream | 537696 | 9303644 ~ 9306869 (-) |
| LOC118964557 | lyz2 | coding | upstream | 552577 | 9318525 ~ 9321762 (-) |
| LOC118964743 | LOC106572855 | coding | upstream | 556966 | 9322914 ~ 9324963 (-) |
| G364572 | LOC106569275 | non-coding | downstream | 15012 | 8745597 ~ 8745819 (-) |
| G364559 | NA | non-coding | downstream | 34341 | 8725792 ~ 8726490 (-) |
| G364555 | NA | non-coding | downstream | 39915 | 8720534 ~ 8720916 (-) |
| G364552 | NA | non-coding | downstream | 46380 | 8707712 ~ 8714451 (-) |
| G364534 | NA | non-coding | downstream | 82702 | 8677793 ~ 8678129 (-) |
| G364643 | NA | non-coding | upstream | 79780 | 8845728 ~ 8900234 (-) |
| G364645 | sptlc1 | non-coding | upstream | 115110 | 8881058 ~ 8886121 (-) |
| G364677 | NA | non-coding | upstream | 154068 | 8920016 ~ 8921632 (-) |
| G364744 | NA | non-coding | upstream | 257801 | 9023749 ~ 9024604 (-) |
| G364722 | NA | non-coding | upstream | 259751 | 9025699 ~ 9027771 (-) |
| G364322 | NA | other | downstream | 456648 | 8303267 ~ 8304183 (-) |
| LOC110524941 | LOC106572051 | other | downstream | 2034851 | 6562531 ~ 6726634 (-) |
| G363470 | LOC106572095 | other | downstream | 2206116 | 6543675 ~ 6554715 (-) |
| LOC110523123 | LOC106572171 | other | downstream | 2806580 | 5945164 ~ 5954687 (-) |
| G361170 | NA | other | downstream | 3678963 | 5080578 ~ 5081868 (-) |
| G364754 | NA | other | upstream | 281594 | 9047542 ~ 9099000 (-) |
| G365752 | NA | other | upstream | 423721 | 9189669 ~ 9190098 (-) |
| G368612 | ctxn3 | other | upstream | 3368104 | 12134052 ~ 12136790 (-) |
| G368921 | NA | other | upstream | 3939618 | 12705566 ~ 12706092 (-) |
| G370333 | NA | other | upstream | 5441242 | 14207190 ~ 14208705 (-) |
