Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964774 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 9711751 ~ 9711969 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051967.1 | True | 219 | mRNA | 0.56 | 1 | 9711751 | 9711969 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522837 | tmem217 | coding | upstream | 19755 | 9690509 ~ 9691996 (+) |
| st8sia4 | LOC100135820 | coding | upstream | 34260 | 9659812 ~ 9677491 (+) |
| pdzph1 | LOC106571915 | coding | upstream | 408580 | 9287057 ~ 9303171 (+) |
| LOC110523155 | diras2 | coding | upstream | 507897 | 9198915 ~ 9203854 (+) |
| auh | auh | coding | upstream | 612749 | 9048724 ~ 9099002 (+) |
| LOC118964779 | NA | coding | downstream | 13469 | 9725438 ~ 9725565 (+) |
| dcp2 | dcp2 | coding | downstream | 70486 | 9782455 ~ 9797823 (+) |
| ca9 | LOC106571618 | coding | downstream | 98755 | 9810724 ~ 9834173 (+) |
| LOC110523166 | LOC106571594 | coding | downstream | 158658 | 9870627 ~ 9874229 (+) |
| LOC110523169 | NA | coding | downstream | 396903 | 10108872 ~ 10124536 (+) |
| G365093 | NA | non-coding | upstream | 24789 | 9635188 ~ 9686962 (+) |
| G365109 | NA | non-coding | upstream | 30182 | 9678974 ~ 9681569 (+) |
| G364942 | pam | non-coding | upstream | 196612 | 9511683 ~ 9515139 (+) |
| G365001 | NA | non-coding | upstream | 230751 | 9477926 ~ 9481000 (+) |
| G364932 | NA | non-coding | upstream | 256686 | 9454357 ~ 9455065 (+) |
| G365077 | reep5 | non-coding | downstream | 62896 | 9774865 ~ 9775577 (+) |
| G365175 | NA | non-coding | downstream | 90649 | 9802618 ~ 9802835 (+) |
| G365190 | NA | non-coding | downstream | 128606 | 9840575 ~ 9840959 (+) |
| G365194 | NA | non-coding | downstream | 134223 | 9846192 ~ 9846403 (+) |
| G364850 | NA | other | upstream | 482520 | 9228838 ~ 9229231 (+) |
| cdc42se2 | cdc42se2 | other | upstream | 865635 | 8775134 ~ 8849107 (+) |
| G362662 | NA | other | upstream | 1792186 | 7918922 ~ 7919565 (+) |
| G362554 | NA | other | upstream | 2019237 | 7690440 ~ 7692514 (+) |
| G362297 | zbtb43 | other | upstream | 2521932 | 7185926 ~ 7189819 (+) |
| G365197 | NA | other | downstream | 136734 | 9848703 ~ 9849154 (+) |
| G366748 | NA | other | downstream | 1264713 | 10976682 ~ 10977152 (+) |
| G366973 | NA | other | downstream | 1713673 | 11425642 ~ 11428710 (+) |
| G367684 | NA | other | downstream | 2166360 | 11878329 ~ 11880035 (+) |
| G368440 | NA | other | downstream | 3396727 | 13108696 ~ 13109134 (+) |
