fut10 (fut10)


Basic Information

Item Value
gene id fut10
gene name fut10
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 10625909 ~ 10637085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601644.2
ATTGTCAACACAAATATGGAAAATGGCCGCGTGCATCCCCGCTACTTCAAAACAAGCTATTCACTATTAACAATACAATTAAACAATTTTAAATAATTTTTAGAAACGCCACTGAACAGGGGGACATTTGAATATGAGTTTTAGCAAGTAGTTTTTCCCTCCGTGATGCTCAATAGTCGAAAGATGGCAAGACTTTCAATAGTTTCTTTGAGGAAACTTTTTGTTTTCTTCCTCTGCCTATCAGCTGTACTTTTCCTTCTGATTACTCTGCAGGTGGTGGTGGAGCTTGGTCAGTTTGAAAGGACAGTACACATCCTCCCTCCAAGCGACCTACACGAGTCAGGCTGGAGACATCGTTTACATGGTAGCGGACTGTTGGCCAGTGAGAGAACCTCCCCTGGGGGTCCGGAGGGACATTACCCTTACATTGTATGGTGGTCCCCACTAACAGGAGAGATTGGCCGACTAGGAGAGTGTGGGACAAACAAGTGCTTCTTCACCATCAACAGGACCCTCtactctcacccatctacacaggCATTCCTTTTCTATGGCACCGATTTCAACATCGAGAGTCTTCCTCTGCCGAGGAGAGAGCACCACCAGTGGGCCTTGTTTCACGAGGAGTCGCCCAAAAACAACTACAAGCTCTTCCACGAGCCCGTCATCACTCTCTTTAACCACACGGCCACCTTCAGCCAGCACTCGCAGCTGCCCCTCACCTCCCAGCACCTGGAGAACCTGGAGGTCCTGACCTCCCAGACCTACCTGGTGTCCCTCAACCAGAAGAACGAGCTGAGGAAAACACTAGCCCCGGTGGTGTACGTCCAGTCAGACTGCGACCCTCCGTCGGACCGGGATGCCTATGTGAGTGAGTTAATGAAGCACATCAGGGTTGATTCCTATGGACAATGCCTCCACAACAAAGACCTGCCTTCCCATCTGAGGGACTCGATTGCCATGGAGGAGCAGGCCTTCTACCAGATCCTGGCCCAGTACAAATTCATTCTGGCCTTTGAGAACGCCGTCTGTGACGACTACATCACCGAGAAACTATGGAGGCCTCTCAAGCTTGGGGTGGTTCCTGTGTATTACGGTGCTCCCAATGTTCGGCAATGGCTGCCGAGCAACAGTAGTGCGGTTGTAGTCGACCCAGACGAGCCCCCTGAAAAACTGGCTCTGTATCTGAAGAGACTAGATGAGGACGACGAGGAGTATGCCACTTATCTGGAGTGGAAGTTGAAGCGTGAAGTCTCCAACCTGGAGTTGGTAAAGGAGCTGAAGGAACGCCCATGGGGTGTCCAGGATCTGACACAGGAGAACTACATAGATGTGTTTGAGTGCATGGTGTGCAGCAGGGTGTGGGAGAACATCGACAGACAGAAAAAGGGCCTTGTTCCTAAAACCTGGCAAGCAGAGGGAAACCACCTAAAGTGTCCACTTCCGAGGGTATTTGACTTTGCTTCAGGCCCTAGAAAGCGGACATCTTTGCGAGGAATTTGGACGGCCAGTTACGAGCAGTCCAAGAAAGAGGCTAGGGCATTGCGTCACTTGGCTGAGAGGAACAAGAATTTCACTGTGGAGCAGTACTGGAAGGAAGTATTCACTGACTAAAACCCTACTAACACTAAAACACTATAATTCACATAGAAAAGACCCTTGTTGTGAAACAGTATCATTCTTCTATGGCCACCCAgtgctttggtggtggtgtgTCAAAGTTCAGAAGCACTATGAAAATGACAATGGTCCACATATGATGACTAATGGTTGAACATGACAATCACACAATAACCTTTGATCAATATATTTCATATCCTTAATATTTCAAAAGCTTGCTGTATAGCTATTGAAATCAACCATAGTTTTGACgaccaaaaaataaaaaaaatgtgattgATTCTAAAAGTGAGAGAATGTCTGGTCTTTCTAACGAAACCTTCCTTAAACCAAATTCCTTCAGGAGTCTACACCTCTGTCACGTTCAGGAATTACCATACAGCTTTTATcttgtttttattatgtttttacGTTAACTTTgcattgcatttttttttactcTATTAAAACGGTCATAAGAAAACA

Function

symbol description
fut10 Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi cisterna membrane and Golgi membrane. Predicted to be integral component of membrane. Orthologous to human FUT10 (fucosyltransferase 10).

NR:

description
alpha-(1,3)-fucosyltransferase 10

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0032580 Golgi cisterna membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0046920 alpha-(1->3)-fucosyltransferase activity molecular_function

KEGG:

id description
K09669 FUT10; alpha-1,3-fucosyltransferase 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601644.2 True 2085 mRNA 0.46 4 10625909 10637085

Neighbor

gene id symbol gene type direction distance location
psd3l LOC106571427 coding upstream 41166 10445084 ~ 10584743 (+)
LOC110523175 LOC106571461 coding upstream 205282 10402095 ~ 10420627 (+)
slc38a9 slc38a9 coding upstream 259208 10341232 ~ 10366701 (+)
gp130 gp130 coding upstream 325663 10283000 ~ 10300246 (+)
ankrd55 ankrd55 coding upstream 344559 10262705 ~ 10281350 (+)
LOC110524950 fut10 coding downstream 17072 10654157 ~ 10656239 (+)
purg purg coding downstream 282986 10920071 ~ 10928473 (+)
LOC110523183 tex15 coding downstream 294451 10931536 ~ 10951201 (+)
ppp2cb LOC105021738 coding downstream 315931 10953016 ~ 10963722 (+)
LOC110523186 LOC106571348 coding downstream 337013 10974098 ~ 10984513 (+)
G365534 NA non-coding upstream 218 10529218 ~ 10625691 (+)
G365570 NA non-coding upstream 32277 10592781 ~ 10593632 (+)
G365234 NA non-coding upstream 33912 10068899 ~ 10591997 (+)
G365499 NA non-coding upstream 140444 10485096 ~ 10485465 (+)
G365405 NA non-coding upstream 204641 10367329 ~ 10421268 (+)
G365686 NA non-coding downstream 140866 10777951 ~ 10779474 (+)
G365709 NA non-coding downstream 182477 10819562 ~ 10821791 (+)
G365720 NA non-coding downstream 195542 10832627 ~ 10834462 (+)
G366663 NA non-coding downstream 227117 10864202 ~ 10864886 (+)
G366701 NA non-coding downstream 251796 10888881 ~ 10889539 (+)
G365197 NA other upstream 776755 9848703 ~ 9849154 (+)
G364850 NA other upstream 1396678 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 1779793 8775134 ~ 8849107 (+)
G362662 NA other upstream 2706344 7918922 ~ 7919565 (+)
G362554 NA other upstream 2933395 7690440 ~ 7692514 (+)
G366748 NA other downstream 339597 10976682 ~ 10977152 (+)
G366973 NA other downstream 788557 11425642 ~ 11428710 (+)
G367684 NA other downstream 1241244 11878329 ~ 11880035 (+)
G368440 NA other downstream 2471611 13108696 ~ 13109134 (+)
G369763 NA other downstream 3128162 13765247 ~ 13769296 (+)

Expression


Co-expression Network