LOC110523186 (LOC106571348)


Basic Information

Item Value
gene id LOC110523186
gene name LOC106571348
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 10974098 ~ 10984513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601661.2
CCGGAGCACGGCTCTGCCAAAATGTGGGAGGAGACATCTGCAGTGGATAAGTACTGTGCATCACCGACAGGCGAGTCATTCGAGCCAGGCCGGCAGCGACAGGTGTGTACCAGATACAAGAGGAAAGGGAAACGCCATCGTCGTCAAACAGGCGGTGCAACAAGAACAGTAATGGCTTTCGACTCGCTGCCCTCCAGAGTAGTCTTGCTCTATGATGAATGGCTTAAACTGGCTGATCCCAGGACAGAGAACTGGCCCCTAATGGCATCGCCGATAGCCCAGACTCTCATCGTAATCGCCTACATCTACTTTGTCACGACGCTGGGCCCTCGGCTGATGGAGAACCGCAAACCCTTTGACCTCAAAAATGCCATGGTCGTCTACAATTTCAGTATAGTGGGCTTCTCCATCTACATGATCTATGAGTATCTGATGTCTGGTTGGGCCAATGGTTACTCCTACGGTTGTGACCTTGTTGACTACTCCAGCAATCCTCTGGCTGTCCGGATGGCATGGACCTGCTGGCTCTACTACTTCTCAAAGTTTATTGAAATGTTGGACACAATCTTCTTCGTCCTCCGCAAAAAGACTAGCCAGGTGACATTCCTTCATGTCTTTCATCACTCTATCATGCCCTTCACTTGGTGGTTTGGAGTCAAGTTTTCAGCAGgtggTATGGGAACCTTCCATGCCATGTTGAACTGCTGTGTCCACGTCCTCATGTACTCCTACTATGCTGTGTGTGCTATGGGGCCTGCCTATCAGAAGTACCTGTGGTGGAAGAAATACATGACCACCATCCAGTTGGTTCAGTTTGTGATGGTGACTGTCCACATTGGTCAGTTCGTCTTCATGAAGGACTGCCCCTACAAGTTCCCGGTTCTTCTCTACATTGTTGGTCTCTACGGACTGATCTTCCTGGTTCTCTTCCTCAACTTCTGGTACCACGCATACACAAAGGGAAAGAGGCTGCCCAAGGTTGCGCAGAAAAGCAAGGCTCTCCAGAATGGCAATGGGGTTCACCATTCCAATGGGGTCGCCAAGGAGGCAACCAACGGCATCTTCGATGGCACAACCAACAAGGTCGCAAACTGCTTTCACCATGGCAATGGCATTCACAAGAAGGAAAAGTAAATGTTGCAGCCTCAGGTTTTAGTTGACGAGCTCAATTACCAACTTCCAGGGCTGTATTTTATATCCAAGTCTCCTTTTTGTTACACTTCCACCATTTCAGAGCGTATTCCCTGTTTTAATTGGTTCCAACTTTCTTTGTTTGTGCTAACAACTTTGTTATCACTGTTATTGAATAGAATCATATGTTCTGTTTGGCTATAGGTGGGTGAGTTAGTGCATGACttttgttcagaaatgtggttaTAGGGACCACTGCACATACCATTTTTCTCAGttacaaatgtaaatgtttttgtgCTGTAATATAATGTGCCTGGTAACAGGCTTTTGAGTATCGGTTTAAACAAGGTGATGATGCTTAATGTCTGGTGCAAACGGAGCATATAAATGGTCTTAGAGCTGCTCTGGTAGAACCTGAAGCCCTGGAATCAGTGGCATACATTTCACTGATTTGAGCTTTAGTCTTTTCATATGACAATCAGTTTGTAGTAAGCGAAATGCACTTCCTGAAATGCTTTATTGCTTATAGTATGCCAAGGGATCATACTTGATGTATTTTGTGTTAATTTAATGTTCACAATGTATATACATGTGTCTTTTTTTATGTTGCTGTTTGAAGGTCAAATGTACAGCAGACTATGTGAAGGCTGTCTGGGCTTTTAGTGTTATTGAAGGAGCTGACCAAAAATGGGCATTTCCTTTGTTTGTGCCCATGGTGAACGAGAACAGAACAATATTGTCTGAATGAAAGCGATTATTTTACTACTGCAGTCAATAGCAAATACTGTGTATTTTTTAGCTATTTGCTCAATATTGTAACGAATTCGGGTGGGTGGCCCCGACCGGGACTAGAATCCGAGTCCCgcgactgtcaagccaacaccttaaccATCACGCCAGGAGGTCCAAACCGCTTGACGAGGTCGCTACAATATTGTTCAAAAAAACAATCTGCTTTTATGTTGAAATAAATTATTTTTACCTACA
>XM_036976770.1
TCGAGCCAGGCCGGCAGCGACAGGCGGTGCAACAAGAACAGTAATGGCTTTCGACTCGCTGCCCTCCAGAGTAGTCTTGCTCTATGATGAATGGCTTAAACTGGCTGATCCCAGGACAGAGAACTGGCCCCTAATGGCATCGCCGATAGCCCAGACTCTCATCGTAATCGCCTACATCTACTTTGTCACGACGCTGGGCCCTCGGCTGATGGAGAACCGCAAACCCTTTGACCTCAAAAATGCCATGGTCGTCTACAATTTCAGTATAGTGGGCTTCTCCATCTACATGATCTATGAGTATCTGATGTCTGGTTGGGCCAATGGTTACTCCTACGGTTGTGACCTTGTTGACTACTCCAGCAATCCTCTGGCTGTCCGGATGGCATGGACCTGCTGGCTCTACTACTTCTCAAAGTTTATTGAAATGTTGGACACAATCTTCTTCGTCCTCCGCAAAAAGACTAGCCAGGTGACATTCCTTCATGTCTTTCATCACTCTATCATGCCCTTCACTTGGTGGTTTGGAGTCAAGTTTTCAGCAGgtggTATGGGAACCTTCCATGCCATGTTGAACTGCTGTGTCCACGTCCTCATGTACTCCTACTATGCTGTGTGTGCTATGGGGCCTGCCTATCAGAAGTACCTGTGGTGGAAGAAATACATGACCACCATCCAGTTGGTTCAGTTTGTGATGGTGACTGTCCACATTGGTCAGTTCGTCTTCATGAAGGACTGCCCCTACAAGTTCCCGGTTCTTCTCTACATTGTTGGTCTCTACGGACTGATCTTCCTGGTTCTCTTCCTCAACTTCTGGTACCACGCATACACAAAGGGAAAGAGGCTGCCCAAGGTTGCGCAGAAAAGCAAGGCTCTCCAGAATGGCAATGGGGTTCACCATTCCAATGGGGTCGCCAAGGAGGCAACCAACGGCATCTTCGATGGCACAACCAACAAGGTCGCAAACTGCTTTCACCATGGCAATGGCATTCACAAGAAGGAAAAGTAAATGTTGCAGCCTCAGGTTTTAGTTGACGAGCTCAATTACCAACTTCCAGGGCTGTATTTTATATCCAAGTCTCCTTTTTGTTACACTTCCACCATTTCAGAGCGTATTCCCTGTTTTAATTGGTTCCAACTTTCTTTGTTTGTGCTAACAACTTTGTTATCACTGTTATTGAATAGAATCATATGTTCTGTTTGGCTATAGGTGGGTGAGTTAGTGCATGACttttgttcagaaatgtggttaTAGGGACCACTGCACATACCATTTTTCTCAGttacaaatgtaaatgtttttgtgCTGTAATATAATGTGCCTGGTAACAGGCTTTTGAGTATCGGTTTAAACAAGGTGATGATGCTTAATGTCTGGTGCAAACGGAGCATATAAATGGTCTTAGAGCTGCTCTGGTAGAACCTGAAGCCCTGGAATCAGTGGCATACATTTCACTGATTTGAGCTTTAGTCTTTTCATATGACAATCAGTTTGTAGTAAGCGAAATGCACTTCCTGAAATGCTTTATTGCTTATAGTATGCCAAGGGATCATACTTGATGTATTTTGTGTTAATTTAATGTTCACAATGTATATACATGTGTCTTTTTTTATGTTGCTGTTTGAAGGTCAAATGTACAGCAGACTATGTGAAGGCTGTCTGGGCTTTTAGTGTTATTGAAGGAGCTGACCAAAAATGGGCATTTCCTTTGTTTGTGCCCATGGTGAACGAGAACAGAACAATATTGTCTGAATGAAAGCGATTATTTTACTACTGCAGTCAATAGCAAATACTGTGTATTTTTTAGCTATTTGCTCAATATTGTAACGAATTCGGGTGGGTGGCCCCGACCGGGACTAGAATCCGAGTCCCgcgactgtcaagccaacaccttaaccATCACGCCAGGAGGTCCAAACCGCTTGACGAGGTCGCTACAATATTGTTCAAAAAAACAATCTGCTTTTATGTTGAAATAAATTATTTTTACCTACA

Function

NR:

description
elongation of very long chain fatty acids protein 7-like

GO: NA

KEGG:

id description
K10250 ELOVL7; elongation of very long chain fatty acids protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601661.2 False 2121 mRNA 0.45 8 10974098 10984513
XM_036976770.1 True 1993 mRNA 0.44 8 10974177 10984513

Neighbor

gene id symbol gene type direction distance location
ppp2cb LOC105021738 coding upstream 10376 10953016 ~ 10963722 (+)
LOC110523183 tex15 coding upstream 22897 10931536 ~ 10951201 (+)
purg purg coding upstream 45626 10920071 ~ 10928473 (+)
LOC110524950 fut10 coding upstream 317859 10654157 ~ 10656239 (+)
fut10 fut10 coding upstream 337013 10625909 ~ 10637085 (+)
depdc1b depdc1b coding downstream 207 10984720 ~ 11004641 (+)
LOC110523188 pde4d coding downstream 41588 11026101 ~ 11418933 (+)
LOC110524952 NA coding downstream 518130 11502643 ~ 11507284 (+)
LOC110523192 plk2 coding downstream 523176 11507689 ~ 11513262 (+)
trnaa-agc-2 NA coding downstream 616947 11601460 ~ 11601532 (+)
G366739 ubxd6 non-coding upstream 6017 10967326 ~ 10968081 (+)
G366684 NA non-coding upstream 21162 10952665 ~ 10952936 (+)
G366703 NA non-coding upstream 43729 10930074 ~ 10930369 (+)
G366704 NA non-coding upstream 44368 10929445 ~ 10929730 (+)
G366678 NA non-coding downstream 20162 11004675 ~ 11005600 (+)
G366681 NA non-coding downstream 21221 11005734 ~ 11006030 (+)
G366766 NA non-coding downstream 27670 11012183 ~ 11012531 (+)
G366786 NA non-coding downstream 53538 11038051 ~ 11038367 (+)
G366797 NA non-coding downstream 64861 11049374 ~ 11051095 (+)
G365197 NA other upstream 1124944 9848703 ~ 9849154 (+)
G364850 NA other upstream 1744867 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2127982 8775134 ~ 8849107 (+)
G362662 NA other upstream 3054533 7918922 ~ 7919565 (+)
G362554 NA other upstream 3281584 7690440 ~ 7692514 (+)
G366973 NA other downstream 441129 11425642 ~ 11428710 (+)
G367684 NA other downstream 893816 11878329 ~ 11880035 (+)
G368440 NA other downstream 2124183 13108696 ~ 13109134 (+)
G369763 NA other downstream 2780734 13765247 ~ 13769296 (+)
G370360 NA other downstream 3271290 14255803 ~ 14259133 (+)

Expression


Co-expression Network