ajm1 (LOC106571253)


Basic Information

Item Value
gene id ajm1
gene name LOC106571253
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11667973 ~ 11697343 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601673.2
ATTAGACGCATTGGAAGCCCCGGGTGCAGGTAGTGTGTAGTCAGTCATCCATCGTAGGCTAGATGGTGCAGAGCATACGCAGAAATCCACTAGCAGTTGGGAAAGAAGGAAGAGTAGTACATGGTTCACCGATAAGGCGGATTACAGTTCTACCTCTAAAGATGCTCGATGTCGTCATTGTGTAGCAGCATTACATCCCTGTCAAAAATGGACAAGCATTCGCTTGGAATATGGACTAAAGCGCAGGGAACGTCAACCTTAAACCAACTTGATGGGGGAAACTAGGAGAGTCCCTTTAAGATGACACGCACAGACCCGCCTGACATACTGGTATCGACTGTgtataaagatataaaagtgtTCCCTGTTTCTTCGCACTCCAAGTCCTCCCAACCCCCCGAACAATGTGATTCCCCAAACCGAAGCACACTGGACAACAATCAGGATAACAAGAGGCACTGCCGTACCTTTGACTACAAGTCACTGGAGTACCCTAAACACCACACATTCTCAATGGAGCACCCGTACAGGAGGGCTGACAGGCATGCTGCTAATCCAGACATGGCCTGGAATGCCTTGGGCCGCCAGCAGGGATACCGCTTTTCTGCACCGGACATTTTCAACCACAGACTGACCCCTCAGCCATTGGTCTCAGACATGGCTAGTGAGGTGGTTGTTCCGGTGCAAAGGAAAAGGACCAGGTCAAAAAGTGCCCCCAGAGTCCAAACTAACCTTACCCCTGTGTCCTTTGAGGAGTCCCCTTCCATGgggaggaggggtagggaggCCCGGAGGGCACCTAGGGACcctaactggagaccagaggtgTCACCACGTAGGGAGTGCTCCTACGCAGCAACCAGGGCACTAATGCATGAGGTGCATCCCATCAAGCTCCAGCCACAGAGGAGTGATGCTAGCCGATATTCACCCCTCTATGTTGCTGAGCATGTAGAAGAGGGAGGGCCTGACAAGCCAGCCACCAGCCCTCACGTCAGGTGTCGGGTGGACATCAAACCAGATGTGGCTGTCTTGCAAAATGCTGGACGGAAGACTGCTACACCCAGAGTTGACATACCTTGGCAGAGGTACCCTAGTGGAGGAAGCAGGAGCCTGACAGTACCTCGCCATTTCACCTTCTCAAGGACCTCAACTCCCACTGACTCTTTTGGTGGTGAGTATGGGCAGGCATACCAGTATTCCCGCAGCATGCCAAATAGTTACATTCAGCCCATGGAGATGCCTCTGCAAAGAATGCCTTCCCCAGGTGATTATTATGGCAGGGAACGCAGGGCTCATTCCAGCCCCAATGTGCCAACCAAATTATTTTATGCAGACGACCCTGGGAGGTATGTGGCCACAGCCCCTCCCCAACCTAGGACTTACTATCAGGATGATCGCTATAGTATGCCAAGCCAAAACCTCACTCCCAAAATGCAGTATGTACAGGATCCAAGGACCCGCGTGGTGCATACTGTACCAGCCCGATCCTATTACACGGAGGTAGAATCTTACCCATACCCAGTTCAAGCTGCATATCCGAAAGCCTATGCAGCAAGTGAACCAGGGCCATATATCATTCAAACCCCGCCGGCAAGAACATTCTATGGAGATGATCTAAGGACTTATCAAATTCAGTCTGTTCCCCCGCGGATATATTACGCGAATGAGATGTATACACCTTCACAGGAGCATCACATTCCAGCAAGGGCATATTATACAGAGGGACGTCGACATGCGCGAGTCGTCCAGCCTCAACCAGATGACTGGTACGGCTCTGAGGTGTCTGGTTATTCCACCCATCACCCTGCCTCGTATGGCTCTCAGGTCACCCCGACCAGAGCTGTTAGGCAAGAGCCAGCGCTAACACCATGGTATGCTAACCCGTGCATTGAGCCACCACGAATCGGCACCGATTCCAAACCTTACTCGAGGTCTTGGGATAATATCCTCAACTCCCGTGTGGAGAGGGAGCAGCCTATCCCAGTTCAGCGGGGTCGGAGTTATGAGAATCTTATTGCCCAAGCAAAGCGCACTGCGGCCGAAGATGACAGACCACAGCCAGTAGTTGTCAACCTTTCCAGTTCACCGAGACGTTATGCAGCCTTGTCTTTGTCTGATAACTCTCTAATTGACAAAAGCCCAACATCGGAGTCAGGGAAGACCACTTCTAGTAAGCTCTGGTTCGTCGCCCCTGAGATCACCATCACTGATAATGACATTCGACCAGGCAACCTTAACAAATTTGAGGCACGAAGAGCCAGCTGGGATGTGCTGCACTCTAAAAGTGCTGTGGTTCCAGAAGCTTCTCAGCCAGACACTATGTCCTGCTCTGTGGACTCTACCAAAGAAAAGACGCACAACAGCGCCTCTCTACAGCAAAGCCTGGAGCAACTTGATGAGCTTCTAGCTGATCTCGTTACTGACTACAAACCCCCTGCCACTAGGAGGCCAAGTGAGGATTTGCTGGACCAACTCAAGAAGCTGATCGATGAAGAAGAAGCAGCATCTCTGTCCAGAAAAGGTTCAAAGGCAGGGTCAGAGGAACCACCCCTGGACAAGCAACCCACCTCTATTAGAATGAACCCTGACGCCCTTCGAGATATGGACTGCAGCAGTGATGCCCTGAGGAGTGGAGACGAGTGCTCCCCAGACCAGAGCCCAGACGAGGACGACAGCATGATGTGCTCAAACAACAAATGCCGACGGACAGAGACCCTATTCAATGCTTGCCTCTACTTCAAATCCTGCCACAGCTGCTACACTTACTACTGCTCCCGCAACTGCCGCAGGGAGGACTGGGACATTCACAAAGAGAGTTGCCTGTATGGCCGAATCGGCAGCGTGTGCCGCCATATCATCAAGCACTGCCGGGAGACTGTCGAGGTCCACAAAGCCTTCTCGCGCATTGCCAAAGTTGGCTTCCTTTCCCGGGGAAGGGGAGTGCTCTTTCTGGGATTCCCAAACCCAGGGCTGTCCGGTAACTTCCTACAGTACGGCCTGGAGAGCCTCCAGATGTCCCCGACTTACCTGTCTCTACGGGAGCTGGACGGCTTCAAGGACAACCTGGGGGAGTATTGCAAGGAGCTCCAGGAGGCAGGCAAGGACTATGACCCAAACGAATGTTTCCTCTTGAATGTATCCATTGCCGTTGGCGAACAAATGCCTGACGGACCTTCACCAAGGAATCAAGCCCCAACTGTCAGGAAATATGCCAAGGTGGCGCTCGCCTCCTACAGCCCGGAGAAGAGTAAAGTTCTTAAGAAAGAGAGGGATATGGAGACGTTGATCCTCACGCCACCCCCTGGAATGGCTGACATCGacaatgagggagaggagggcaggaagGCCAGGGAGATCTGCTTCATCAACATCCAGCGGGAGTTACGAATTCGAGGAGTTTTTCTACGCCACGAATATCCAAAGGTATACCAGCAGCTCTGCGAGTTTGTGGAAAGTAACAGGAGGTTCACCCCCACAACCATCTACCCCATTGACAAGAGGACTGGTAAGCAGTTCATGTGCATGATCATGGCTGCTTCTGAGCCCAGAACACTGGACTGGGTAGGCACCCCCCATCTCCTCGATGACATTATTTAAGTGCACCTTTGGttgtacatatatatgtatagaaatacatatatattgttatacatatctatatatcaAGCCTATTTATTATACATGTTTGTAGATATGTATTTTACTATTGAAAAGAGATATATTCATGTCTGTGTGGTCAGTATTATTCATTCTTGGAATATTGCCTGTCAGATGCGGATATGAGTACCACCGGctccattatttatttattttcatcttTCATCTTTCATCAACTTAATTCACCATTTGGTAAATGTATTCACAACATTAATCATGTATTGGTGCCAGGTCATTTTCTATTCTATTATTCTGCATTATTCTTTTTGGGGCAGGACTTTTGGTAgtaaaacttttttttgtttgtattaatTAAACATTTCTAAATGCATTATTTGAGGCTAAGTAAAACGTGACTATTTTTCATATCTGATTGAAGTGGCATATAACgcagaacattttaaaaaacatgtaTTATTTTCTTAGCTACTCAAATACTTTCTATGCAAAGGAAAATGCTTAATAGGATCATTTCCACATTCTAGTAAAACGGTTATTTGCGCTTGATAAAAGGATACAGAAATactatttatattatattatacaatattatattatattatccaGTATCCACGGGACATAACTATCCTTCTTTTagaatgtgacatattttattAAACTCTAACAAAAATAAACCGTTTTTgatgtaattgaaaataagattaACAAAATACAATACTTTGGGTGGATTTAAACTACTAGTTCCTCAGAATGCGCAGAAAGACACTGTTTAATGAGAAAAAAGGAAAGCTGTGCTAATCTAATTGTCTTAGAAAGGGGTTTCAAAGTCTCACTGCTTAGATTGGTAGTGCTGTAAATTGTTACCTTATTCCTGAAAGTGGTTTTATTGACGTGAGTTTAATTATTTCAATGGTGCTTTAATGTATGCTTGGTAGAATTACTGGAGCAATAACGGACTTGAAGATAAACATAAAATGATTGATATGGTACCAGTCGTGTGTTATACACAATAGGTGTTGGCTTGTACTGTTCAATTTGAAACACTGTGAATAGTAAAATAAGTCAATCATTCATCAACTTTAGACATGGTTGGTACCGTGGAATCATGCAATCTCACATAAGCTAGTTTATAAATTGCTATTTTTACATAATTTACAGAGCATAATATATATGAATTAGCGAGCGAGATTTGTTACAGTTATTGTCCTTAGAAAAAGGTGAGCCAGGTTTGGCAACAGTAGCTGTATGGTATGTAAAGTTTAAATGCTTGAAGAAGTTAGTTGTGTATTTGTGGTGCACTAGGTTGATTACGTGTGTGATATTTTTTGTATGAGAATGAGAACCTTCAAAAAGAAAATGGGATATGAACAGCTATGTTGTCTCATAATTATAATTTTATTTAGCCTTAGTTTGCAGATTAAAATATCGAACAAAACCTCAGTATCCAGGAAATGTTACAGAGaacatttctctaaaatgttattTTAGACAGATCTCTTTGACAAGGGTCTCACATACATATAtattgtttctgtgtgaaatTGACAATTTTTCATTACTCTATGAATTCTATAGTTTATTTTAAACCAATGTTCAGTATCTACTGCTCTTTTGAGCTCAACTATCTGTCAGCAGCAGGTTTACATAGATATCAGCATAGTTTACATTCATATCATAGCTTAACACTTTCTGAGGAAGGACTATTGTTTATAGCCTGTAGCACATATTTCAGATACACTTGTTTGGCTGACTGGATGTGTACAGATGCAATGAGAACGAACTGACTGCATGTCGTTGTATTTATTTTCCTCAGCTTTATCATAACCTCAATGATGACAAAATACAATAACCTGCTTGATGATTTGATATTTAAACATGGTTGAGAACTATTATACTATAGaaaaaaatattgatattttTGATTGTGTCAGCCATTCAAGTTAAAACAAGGAAATAAAGAGACCTCAAATTAAAAAATGTTTAGAAAATGTTGTTTGTTGTATTTTTTCTACTTTCATCATATGTATCTGAGTATGTGATATTTATAAACATATCTAATAAATGGAATGGGAACACTG
>TU417793
CTTAATTCACCATTTGGTAAATGTATTCACAACATTAATCATGTATTGGTGCCAGGTCATTTTCTATTCTATTATTCTGCATTATTCTTTTTGGGGCAGGACTTTTGGTAgtaaaacttttttttgtttgtattaatTAAACATTTCTAAATGCATTATTTGAGGCTAAGTAAAACGTGACTATTTTTCATATCTGATTGAAGTGGCATATAACgcagaacattttaaaaaacatgtaTTATTTTCTTAGCTACTCAAATACTTTCTATGCAAAGGAAAATGCTTAATAGGATCATTTCCACATTCTAGTAAAACGGTTATTTGCGCTTGATAAAAGGATACAGAAATactatttatattatattatacaatattatattatattatccaGTATCCACGGGACATAACTATCCTTCTTTTagaatgtgacatattttattAAACTCTAACAAAAATAAACCGTTTTTgatgtaattgaaaataagattaACAAAATACAATACTTTGGGTGGATTTAAACTACTAGTTCCTCAGAATGCGCAGAAAGACACTGTTTAATGAGAAAAAAGGAAAGCTGTGCTAATCTAATTGTCTTAGAAAGGGGTTTCAAAGTCTCACTGCTTAGATTGGTAGTGCTGTAAATTGTTACCTTATTCCTGAAAGTGGTTTTATTGACGTGAGTTTAATTATTTCAATGGTGCTTTAATGTATGCTTGGTAGAATTACTGGAGCAATAACGGACTTGAAGATAAACATAAAATGATTGATATGGTACCAGTCGTGTGTTATACACAATAGGTGTTGGCTTGTACTGTTCAATTTGAAACACTGTGAATAGTAAAATAAGTCAATCATTCATCAACTTTAGACATGGTTGGTACCGTGGAATCATGCAATCTCACATAAGCTAGTTTATAAATTGCTATTTTTACATAATTTACAGAGCATAATATATATGAATTAGCGAGCGAGATTTGTTACAGTTATTGTCCTTAGAAAAAGGTGAGCCAGGTTTGGCAACAGTAGCTGTATGGTATGTAAAGTTTAAATGCTTGAAGAAGTTAGTTGTGTATTTGTGGTGCACTAGGTTGATTACGTGTGTGATATTTTTTGTATGAGAATGAGAACCTTCAAAAAGAAAATGGGATATGAACAGCTATGTTGTCTCATAATTATAATTTTATTTAGCCTTAGTTTGCAGATTAAAATATCGAACAAAACCTCAGTATCCAGGAAATGTTACAGAGaacatttctctaaaatgttattTTAGACAGATCTCTTTGACAAGGGTCTCACATACATATAtattgtttctgtgtgaaatTGACAATTTTTCATTACTCTATGAATTCTATAGTTTATTTTAAACCAATGTTCAGTATCTACTGCTCTTTTGAGCTCAACTATCTGTCAGCAGCAGGTTTACATAGATATCAGCATAGTTTACATTCATATCATAGCTTAACACTTTCTGAGGAAGGACTATTGTTTATAGCCTGTAGCACATATTTCAGATACACTTGTTTGGCTGACTGGATGTGTACAGATGCAATGAGAACGAACTGACTGCATGTCGTTGTATTTATTTTCCTCAGCTTTATCATAACCTCAATGATGACAAAATACAATAACCTGCTTGATGATTTGATATTTAAACATGGTTGAGAACTATTATACTATAGaaaaaaatattgatattttTGATTGTGTCAGCCATTCAAGTTAAAACAAGGAAATAAAGAGACCTCAAATTAAAAAATGTTTAGAAAATGTTGTTTGTTGTATTTTTTCTACTTTCATCATATGTATCTGAGTATGTGATATTTATAAACATATCTAATAAATGGAATGGGAACACTG

Function

NR:

description
PREDICTED: uncharacterized protein C9orf172-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601673.2 False 5699 mRNA 0.44 2 11667973 11697343
TU417793 True 1863 lncRNA 0.31 1 11667973 11669835

Neighbor

gene id symbol gene type direction distance location
LOC110523194 LOC106571259 coding downstream 19461 11642465 ~ 11648512 (-)
LOC110523193 gpbp1 coding downstream 37847 11619804 ~ 11630126 (-)
LOC110523189 rab3c coding downstream 169772 11433653 ~ 11498201 (-)
LOC110523190 NA coding downstream 210314 11444736 ~ 11457659 (-)
LOC118964560 NA coding downstream 410149 11256230 ~ 11258138 (-)
LOC110523196 LOC106571245 coding upstream 51114 11748457 ~ 11787242 (-)
aldh7a1 aldh7a1 coding upstream 89910 11787253 ~ 11794400 (-)
LOC110523198 LOC106571668 coding upstream 110990 11808333 ~ 11811017 (-)
marchf3 march3 coding upstream 158957 11856300 ~ 11878001 (-)
c5h5orf63 cssa01h5orf63 coding upstream 182963 11880306 ~ 11884575 (-)
G367587 NA non-coding downstream 1980 11665596 ~ 11665993 (-)
G367585 NA non-coding downstream 5066 11662626 ~ 11662907 (-)
G367582 NA non-coding downstream 9858 11657823 ~ 11658115 (-)
G367581 NA non-coding downstream 10514 11657117 ~ 11657459 (-)
G367572 NA non-coding downstream 34514 11633255 ~ 11633459 (-)
G367608 NA non-coding upstream 2405 11699748 ~ 11699979 (-)
G367723 NA non-coding upstream 63108 11760451 ~ 11760654 (-)
G367725 NA non-coding upstream 65027 11762370 ~ 11762584 (-)
G367728 NA non-coding upstream 72199 11769542 ~ 11769746 (-)
G365752 NA other downstream 2477875 9189669 ~ 9190098 (-)
G364754 NA other downstream 2617265 9047542 ~ 9099000 (-)
G364322 NA other downstream 3363790 8303267 ~ 8304183 (-)
LOC110524941 LOC106572051 other downstream 4941993 6562531 ~ 6726634 (-)
G363470 LOC106572095 other downstream 5113258 6543675 ~ 6554715 (-)
G368612 ctxn3 other upstream 436709 12134052 ~ 12136790 (-)
G368921 NA other upstream 1008223 12705566 ~ 12706092 (-)
G370333 NA other upstream 2509847 14207190 ~ 14208705 (-)
G370635 NA other upstream 2729995 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 3295785 14988147 ~ 14995197 (-)
G367594 NA non-coding upstream 12586 11682421 ~ 11682640 (-)
G367597 NA non-coding upstream 15344 11685179 ~ 11685444 (-)
G367598 NA non-coding upstream 17362 11687197 ~ 11687411 (-)
G367599 NA non-coding upstream 17863 11687698 ~ 11687903 (-)
G367601 NA non-coding upstream 22993 11692828 ~ 11693054 (-)

Expression


Co-expression Network