Item | Value |
---|---|
gene id | megf10 |
gene name | megf10 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 11947001 ~ 12051563 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
megf10 | Acts upstream of or within myofibril assembly. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Used to study myopathy. Human ortholog(s) of this gene implicated in early-onset myopathy-areflexia-respiratory distress-dysphagia syndrome. Orthologous to human MEGF10 (multiple EGF like domains 10). |
description |
---|
multiple epidermal growth factor-like domains protein 10 |
id | description |
---|---|
K24068 | MEGF10_11; multiple epidermal growth factor-like domains protein 10/11 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036976788.1 | False | 2339 | mRNA | 0.58 | 14 | 11947001 | 12038547 |
XM_021601689.2 | False | 5969 | mRNA | 0.48 | 25 | 11947003 | 12051563 |
XM_021601691.2 | True | 5963 | mRNA | 0.48 | 25 | 11947003 | 12051563 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110523202 | NA | coding | upstream | 24075 | 11919738 ~ 11922926 (+) |
lmnb1 | lmnb1 | coding | upstream | 92169 | 11832909 ~ 11854832 (+) |
phax | phax | coding | upstream | 138925 | 11803920 ~ 11808076 (+) |
trnaa-agc-2 | NA | coding | upstream | 345469 | 11601460 ~ 11601532 (+) |
LOC110523192 | plk2 | coding | upstream | 433739 | 11507689 ~ 11513262 (+) |
prrc1 | prrc1 | coding | downstream | 5389 | 12056952 ~ 12093392 (+) |
LOC110523206 | ctxn3 | coding | downstream | 62140 | 12113703 ~ 12134568 (+) |
slc12a2 | nkcc1a | coding | downstream | 129205 | 12180768 ~ 12261242 (+) |
LOC110523213 | LOC106571108 | coding | downstream | 265545 | 12317108 ~ 12321576 (+) |
LOC110523216 | LOC106570966 | coding | downstream | 319347 | 12370910 ~ 12560586 (+) |
G367809 | NA | non-coding | upstream | 16768 | 11924938 ~ 11930233 (+) |
G367682 | cssa01h5orf63 | non-coding | upstream | 63788 | 11880329 ~ 11883213 (+) |
G367670 | NA | non-coding | upstream | 128813 | 11817847 ~ 11818188 (+) |
G367663 | LOC106571668 | non-coding | upstream | 136659 | 11809282 ~ 11810342 (+) |
G367654 | aldh7a1 | non-coding | upstream | 141635 | 11787255 ~ 11805366 (+) |
G367867 | NA | non-coding | downstream | 19850 | 12071413 ~ 12147440 (+) |
G367933 | NA | non-coding | downstream | 125072 | 12176635 ~ 12176853 (+) |
G367934 | NA | non-coding | downstream | 126271 | 12177834 ~ 12178295 (+) |
G367941 | NA | non-coding | downstream | 136473 | 12188036 ~ 12188273 (+) |
G367944 | NA | non-coding | downstream | 141098 | 12192661 ~ 12192892 (+) |
G367684 | NA | other | upstream | 66966 | 11878329 ~ 11880035 (+) |
G366973 | NA | other | upstream | 518291 | 11425642 ~ 11428710 (+) |
G366748 | NA | other | upstream | 969849 | 10976682 ~ 10977152 (+) |
G365197 | NA | other | upstream | 2097847 | 9848703 ~ 9849154 (+) |
G364850 | NA | other | upstream | 2717770 | 9228838 ~ 9229231 (+) |
G368440 | NA | other | downstream | 1057133 | 13108696 ~ 13109134 (+) |
G369763 | NA | other | downstream | 1713684 | 13765247 ~ 13769296 (+) |
G370360 | NA | other | downstream | 2204240 | 14255803 ~ 14259133 (+) |
G370382 | smarcb1 | other | downstream | 2269541 | 14321104 ~ 14325895 (+) |
G370414 | NA | other | downstream | 2316109 | 14367672 ~ 14368161 (+) |