Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523206 |
| gene name | ctxn3 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 12113703 ~ 12134568 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ctxn3 | Predicted to be located in membrane. Predicted to be integral component of membrane. |
| description |
|---|
| cortexin-3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021601693.2 | True | 1757 | mRNA | 0.45 | 2 | 12113703 | 12134568 |
12,104,000
12,108,000
12,112,000
12,116,000
12,120,000
12,124,000
12,128,000
12,132,000
12,136,000
12,140,000
12,144,000
12,148,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prrc1 | prrc1 | coding | upstream | 20311 | 12056952 ~ 12093392 (+) |
| megf10 | megf10 | coding | upstream | 62140 | 11947001 ~ 12051563 (+) |
| LOC110523202 | NA | coding | upstream | 190777 | 11919738 ~ 11922926 (+) |
| lmnb1 | lmnb1 | coding | upstream | 258871 | 11832909 ~ 11854832 (+) |
| phax | phax | coding | upstream | 305627 | 11803920 ~ 11808076 (+) |
| slc12a2 | nkcc1a | coding | downstream | 46200 | 12180768 ~ 12261242 (+) |
| LOC110523213 | LOC106571108 | coding | downstream | 182540 | 12317108 ~ 12321576 (+) |
| LOC110523216 | LOC106570966 | coding | downstream | 236342 | 12370910 ~ 12560586 (+) |
| nr5a1b | LOC106570956 | coding | downstream | 440011 | 12574579 ~ 12592217 (+) |
| psmb7 | psmb7 | coding | downstream | 492504 | 12627072 ~ 12647406 (+) |
| G367840 | NA | non-coding | upstream | 119384 | 11993667 ~ 11994319 (+) |
| G367809 | NA | non-coding | upstream | 183470 | 11924938 ~ 11930233 (+) |
| G367682 | cssa01h5orf63 | non-coding | upstream | 230490 | 11880329 ~ 11883213 (+) |
| G367670 | NA | non-coding | upstream | 295515 | 11817847 ~ 11818188 (+) |
| G367663 | LOC106571668 | non-coding | upstream | 303361 | 11809282 ~ 11810342 (+) |
| G367933 | NA | non-coding | downstream | 42067 | 12176635 ~ 12176853 (+) |
| G367934 | NA | non-coding | downstream | 43266 | 12177834 ~ 12178295 (+) |
| G367941 | NA | non-coding | downstream | 53468 | 12188036 ~ 12188273 (+) |
| G367944 | NA | non-coding | downstream | 58093 | 12192661 ~ 12192892 (+) |
| G367946 | NA | non-coding | downstream | 60204 | 12194772 ~ 12194983 (+) |
| G367684 | NA | other | upstream | 233668 | 11878329 ~ 11880035 (+) |
| G366973 | NA | other | upstream | 684993 | 11425642 ~ 11428710 (+) |
| G366748 | NA | other | upstream | 1136551 | 10976682 ~ 10977152 (+) |
| G365197 | NA | other | upstream | 2264549 | 9848703 ~ 9849154 (+) |
| G364850 | NA | other | upstream | 2884472 | 9228838 ~ 9229231 (+) |
| G368440 | NA | other | downstream | 974128 | 13108696 ~ 13109134 (+) |
| G369763 | NA | other | downstream | 1630679 | 13765247 ~ 13769296 (+) |
| G370360 | NA | other | downstream | 2121235 | 14255803 ~ 14259133 (+) |
| G370382 | smarcb1 | other | downstream | 2186536 | 14321104 ~ 14325895 (+) |
| G370414 | NA | other | downstream | 2233104 | 14367672 ~ 14368161 (+) |
