Item | Value |
---|---|
gene id | LOC110523223 |
gene name | LOC106570883 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 12802832 ~ 12978339 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
DENN domain-containing protein 1A |
id | description |
---|---|
K20160 | DENND1; DENN domain-containing protein 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036976817.1 | False | 3486 | mRNA | 0.59 | 23 | 12802832 | 12978339 |
XM_036976815.1 | False | 3596 | mRNA | 0.58 | 24 | 12802833 | 12978339 |
XM_036976818.1 | False | 3458 | mRNA | 0.58 | 23 | 12802833 | 12978339 |
XM_036976816.1 | False | 3532 | mRNA | 0.58 | 23 | 12802834 | 12978339 |
XM_036976819.1 | True | 3394 | mRNA | 0.58 | 22 | 12802834 | 12978339 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
psmb7 | psmb7 | coding | upstream | 155426 | 12627072 ~ 12647406 (+) |
nr5a1b | LOC106570956 | coding | upstream | 210615 | 12574579 ~ 12592217 (+) |
LOC110523216 | LOC106570966 | coding | upstream | 242246 | 12370910 ~ 12560586 (+) |
LOC110523213 | LOC106571108 | coding | upstream | 481256 | 12317108 ~ 12321576 (+) |
slc12a2 | nkcc1a | coding | upstream | 541590 | 12180768 ~ 12261242 (+) |
ptpa | ptpa | coding | downstream | 111388 | 13089727 ~ 13107713 (+) |
ntmt1 | ntmt1 | coding | downstream | 561631 | 13539970 ~ 13543920 (+) |
fkbp15a | fkbp15 | coding | downstream | 579415 | 13557754 ~ 13582939 (+) |
rpl12 | rpl12 | coding | downstream | 624870 | 13603209 ~ 13606051 (+) |
LOC118964769 | NA | coding | downstream | 625990 | 13604329 ~ 13604454 (+) |
G368281 | NA | non-coding | upstream | 18286 | 12782240 ~ 12784546 (+) |
G368216 | NA | non-coding | upstream | 119088 | 12680241 ~ 12683744 (+) |
G368126 | NA | non-coding | upstream | 283668 | 12515015 ~ 12519164 (+) |
G368124 | NA | non-coding | upstream | 290324 | 12511759 ~ 12512508 (+) |
G368039 | NA | non-coding | upstream | 433781 | 12368778 ~ 12369051 (+) |
G368413 | NA | non-coding | downstream | 56433 | 13034772 ~ 13034998 (+) |
G368422 | NA | non-coding | downstream | 74168 | 13052507 ~ 13052933 (+) |
G368424 | NA | non-coding | downstream | 77018 | 13055357 ~ 13055898 (+) |
G368432 | LOC106570862 | non-coding | downstream | 82459 | 13060798 ~ 13065748 (+) |
G368441 | NA | non-coding | downstream | 131714 | 13110053 ~ 13110260 (+) |
G367684 | NA | other | upstream | 922797 | 11878329 ~ 11880035 (+) |
G366973 | NA | other | upstream | 1374122 | 11425642 ~ 11428710 (+) |
G366748 | NA | other | upstream | 1825680 | 10976682 ~ 10977152 (+) |
G365197 | NA | other | upstream | 2953678 | 9848703 ~ 9849154 (+) |
G364850 | NA | other | upstream | 3573601 | 9228838 ~ 9229231 (+) |
G368440 | NA | other | downstream | 130357 | 13108696 ~ 13109134 (+) |
G369763 | NA | other | downstream | 786908 | 13765247 ~ 13769296 (+) |
G370360 | NA | other | downstream | 1277464 | 14255803 ~ 14259133 (+) |
G370382 | smarcb1 | other | downstream | 1342765 | 14321104 ~ 14325895 (+) |
G370414 | NA | other | downstream | 1389333 | 14367672 ~ 14368161 (+) |