LOC118964768


Basic Information

Item Value
gene id LOC118964768
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13605700 ~ 13605821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051961.1
CCCGCCACTTTGCCTGTCTGTGTGACTGAGTGTAGTCCAGTGGAGGCGAAGATGGACCCAGCTCTAGGAAACAGGGCTGCCCAGACAGTGGGAAGCTCTGTGCCGAAAGGTCTGGAACAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051961.1 True 122 mRNA 0.57 1 13605700 13605821

Neighbor

gene id symbol gene type direction distance location
LOC118964766 NA coding upstream 251 13605324 ~ 13605449 (+)
LOC118964767 NA coding upstream 831 13604744 ~ 13604869 (+)
LOC118964769 NA coding upstream 1246 13604329 ~ 13604454 (+)
fkbp15a fkbp15 coding upstream 25237 13557754 ~ 13582939 (+)
ntmt1 ntmt1 coding upstream 61780 13539970 ~ 13543920 (+)
LOC118964562 NA coding downstream 7213 13613034 ~ 13644128 (+)
ccn1l1 LOC106570334 coding downstream 41664 13647485 ~ 13651835 (+)
lmo4a lmo41 coding downstream 62352 13668173 ~ 13685140 (+)
LOC110523240 fpgs coding downstream 200964 13806785 ~ 13818030 (+)
gpr107 LOC106570369 coding downstream 212506 13818327 ~ 13850807 (+)
G369584 lrsam1 non-coding upstream 11053 13590579 ~ 13594647 (+)
G369580 NA non-coding upstream 36190 13569180 ~ 13569510 (+)
G369551 NA non-coding upstream 84772 13520714 ~ 13520928 (+)
G369550 NA non-coding upstream 88774 13516723 ~ 13516926 (+)
G369619 NA non-coding downstream 53941 13659762 ~ 13660150 (+)
G369719 NA non-coding downstream 94583 13700404 ~ 13700664 (+)
G369720 NA non-coding downstream 97095 13702916 ~ 13703134 (+)
G369721 NA non-coding downstream 97350 13703171 ~ 13703492 (+)
G369722 NA non-coding downstream 97727 13703548 ~ 13703868 (+)
G368440 NA other upstream 496566 13108696 ~ 13109134 (+)
G367684 NA other upstream 1725665 11878329 ~ 11880035 (+)
G366973 NA other upstream 2176990 11425642 ~ 11428710 (+)
G366748 NA other upstream 2628548 10976682 ~ 10977152 (+)
G365197 NA other upstream 3756546 9848703 ~ 9849154 (+)
G369763 NA other downstream 159426 13765247 ~ 13769296 (+)
G370360 NA other downstream 649982 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 715283 14321104 ~ 14325895 (+)
G370414 NA other downstream 761851 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 1198840 14798616 ~ 14805526 (+)

Expression


Co-expression Network