glipr2 (LOC106570345)


Basic Information

Item Value
gene id glipr2
gene name LOC106570345
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13782097 ~ 13797656 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976830.1
tgtgtgtgtgtgtgttcttttgtaTTAATTTATTGGTAAATGCCGATACCTCTTATATGGAATCTCTCCTTCGATGGAATGGAGGATGGGTTGTCCTGCTGTACATATAGGACTGCGCTATCACCACACACAgcaatgaacagagagagagggagagatcagtgAAACaacaagagagaaaaagagatagcGAGACAGAGGAGGAAGTGGTGTATCACTGGGAATCTTAATAAGTTCAGCGGAAGAACAAAACAATGACAGaCTGTGGTTTTGAGAGGGAGTTTGTGGATGCTCATAATGACTATCGCAGGAAGCATGGTGCCCCGCCCCTAGCTCTGAGCAGAGACCTGTGTAACTCCGCCCAGAAATGGGCAGACCATCTTCTGTCAATCAAAAGCCTGAAGCACAGCTCCACCAATCACGGAGAAAACCTTTACTATGCATACAGCTCAACCCCCAAAAAACCTGTTGGGAAGGATGCAGTGGACAGTTGGTACAGTGAAATCAAAGATTACCACTTCAATAAACCTGGCTTCAGCTCCGGTACAGGTCACTTCACCCAGGTGGTTTGGAAGGACTGCAGTGAGGTAGGTGTGGGCCTGGCCACAGATGGGCAAACAATCTTTGTAGTGGGCCAGTACCACCCAGCTGGCAACATGTGCAACGCGGGCTTCTTTGAGAAGAATGTCCTACCACTGGGTAGCTCCACCTCTAGAGCCCCCAAATGTTTCCCCACAGCCGGAGAAGGAGGGGGCCTGAGTGTACCCCAATCTAAAATTGCCAGATCCTCTTCACCTGCATATAAGGCCCCTCCTCAGGCGAACGGCACTGACCTGGGCCAGTTCCACAGAGACTTCCTACGGGCATGTAACAACCAGCGGATGGCACACGGAGCCCCAGCCCTCACACTGGACCCAGCCCTGAGTCAGGGGGCGCAGGCATGGGCAGAAACTCTACTGGGAGAGCGGGTGCTGAAgaactcctcctccccccatgGTGAAAATATCTGGGCCAAGACGGGGTCAGCGGGCATCACTGCTACGGGTCAAGAGGTGGTGGACGCCTGGTACAAACAAGAGGAGAACTATGACTTCTCCAAAACAGGACATCAGGACAAAACAGGGCAGTTCACACAACTGGTGTGGCGTAGCTCCAAGGAGGTGGGCGTCGGCATGGCAAACGGTGGCACGGGGATGCTTGTCGTGGTGGCACACTTTAAACCGGCTGGCAACATCAGCAACCCCGGTTACCACGCTCAGAATGTGATGCCAAAAGGGTCGAAAGTTACCGATAAACCAGTGGAGGTCGTCACTTCGAGAATGCAGGCGTTGGCCGTGAACTCACTGTCAGCCAATGAGCTTGGCCAGTTCGGCCGGGCTCTTCTGAAGTCTCTCAACCAATACCGGAGCCAGCACGGGGCATTACCTCTGGTGCTAAGCCCTGCCCTCACTAGGGAGGCCCAGGATTGGGCGGCTCACCTGGTGAGCATCAACACACTGATGAATAGTGGCAAAGGCCACGGGGAGAACATATTCTACTGCTCTGGCTCCAGCACAGCGACCCCTACTGGATCAGATGTGGCCGAGTCTTGGTACAAGGAGATTGAGAAGTATAATTTCTCATCCCCTGGTTTTCAGAGTGGAGCAGGTAATTTCACTCAAATGGTCTGGAAGTCCTCAAAGCAAGTAGGCGTGGGTTTGGCGACCAGTGGGCGGGGCACGTTTATCGCCGTGGCGTTCTACGATCCAGCGGGCAACATCACCAACCCAGGCTATTTCCATGACAACGTGAAAACCAAAGGAAGCACACTTTAGTCTGAgccatatgtactgtatgtatgccgGCACTCCCAAAGGTTTCTATAGGAACGGGTGCTTATCTGGGCAAACACGTTGTTGCTGTTATCTTTGGTTGTTGCTATGATTTGTCCTCTTTTGGAAGGCTAAGAATCGTTTTTTGTTAGTTCATTGTTTTCCATAGATGGCGCCATTCGAACGCGCCACGCAGTTGCCAGGAGCCATCAGTGTAGACGGCCGTTGCACGGCCGTTGCGAGACAAACCTGACCTTAACTTTTTTAACTTCTATCTCAAATGATACCCTTACATTGTTATTTTCTAACCAACAACAGTAATTTGGGAAATCTGTATAAATGGATTTTACGTTGTCTTAATAGGAAATAATTTTAATGGTTATGGGTATTTTTTCATAACTGCAATATACAAGTAAGATTTTCACCGGACAGTTTCTTTTATAAATTCATTTTTCTGTTACCTCGAGTTATTTGGCTTTGAACTCGTCCTATAatcgtatttgtggccaaagcataaactggagaaaaaaaatccacctCAAATAGACAGTTTCAtaaatgcttgctatttcctcatagaacaTGATGTCACGTTGGCTCGCTGAGCAGGCCAATCAGTGGTCAACTTGCATGAACATTTCTAATGACGGGtatactcccacaccattctgttgttggggtatgtcCAAGCCATTCacccgcgggacggttgagctaatgcgATTAGCTGTAGGTCATATTTCGTAGAAAACGCTGGACAGTTACTTAAAACCCGAAATGTAATGCCTTTAATCTCGTGCACGTTTTTGTAATTTACTGTCCATGAATAGAGAAATGTCGCTTTTTAAATGTATTCAATGATGTTTATCAAACATGTTGACATATAGACTGAGACTGCACTGTGTTGACATACAACGGGCAATAAATGGTGGAATTACATGTTTGTTGGTTGTAACATTTGTGCCACACTTTGAAAAAAATATTCAACGAGAGCTTACATCTAGTTAGCATCCTTGCTGCCGTCTTCCACCAGCAGAGGGAAACAGCTTGTTGTTACCTTTCACTGTATTCCCTGTCAAATAAACAGACAATCTAACTGGA
>XM_036976829.1
TTCTTGTTTACATTTTGCGGTGTGTTGCTATGAACAATAGAGGAACGTTCGCAAGTGGTGACACAGCTTCCTTCCTGTGTGTCAGATGAGTGTACTCTCTAGATGTAGGGTGCAAAAGAAATCTCAATATAATTCACTACACTTTACTCCCACCCAAAAGGACCAAGCTGAGGCTGCAGTGTCAACATGGCCCTCCGATTTGCAGTTCAGCGGAAGAACAAAACAATGACAGaCTGTGGTTTTGAGAGGGAGTTTGTGGATGCTCATAATGACTATCGCAGGAAGCATGGTGCCCCGCCCCTAGCTCTGAGCAGAGACCTGTGTAACTCCGCCCAGAAATGGGCAGACCATCTTCTGTCAATCAAAAGCCTGAAGCACAGCTCCACCAATCACGGAGAAAACCTTTACTATGCATACAGCTCAACCCCCAAAAAACCTGTTGGGAAGGATGCAGTGGACAGTTGGTACAGTGAAATCAAAGATTACCACTTCAATAAACCTGGCTTCAGCTCCGGTACAGGTCACTTCACCCAGGTGGTTTGGAAGGACTGCAGTGAGGTAGGTGTGGGCCTGGCCACAGATGGGCAAACAATCTTTGTAGTGGGCCAGTACCACCCAGCTGGCAACATGTGCAACGCGGGCTTCTTTGAGAAGAATGTCCTACCACTGGGTAGCTCCACCTCTAGAGCCCCCAAATGTTTCCCCACAGCCGGAGAAGGAGGGGGCCTGAGTGTACCCCAATCTAAAATTGCCAGATCCTCTTCACCTGCATATAAGGCCCCTCCTCAGGCGAACGGCACTGACCTGGGCCAGTTCCACAGAGACTTCCTACGGGCATGTAACAACCAGCGGATGGCACACGGAGCCCCAGCCCTCACACTGGACCCAGCCCTGAGTCAGGGGGCGCAGGCATGGGCAGAAACTCTACTGGGAGAGCGGGTGCTGAAgaactcctcctccccccatgGTGAAAATATCTGGGCCAAGACGGGGTCAGCGGGCATCACTGCTACGGGTCAAGAGGTGGTGGACGCCTGGTACAAACAAGAGGAGAACTATGACTTCTCCAAAACAGGACATCAGGACAAAACAGGGCAGTTCACACAACTGGTGTGGCGTAGCTCCAAGGAGGTGGGCGTCGGCATGGCAAACGGTGGCACGGGGATGCTTGTCGTGGTGGCACACTTTAAACCGGCTGGCAACATCAGCAACCCCGGTTACCACGCTCAGAATGTGATGCCAAAAGGGTCGAAAGTTACCGATAAACCAGTGGAGGTCGTCACTTCGAGAATGCAGGCGTTGGCCGTGAACTCACTGTCAGCCAATGAGCTTGGCCAGTTCGGCCGGGCTCTTCTGAAGTCTCTCAACCAATACCGGAGCCAGCACGGGGCATTACCTCTGGTGCTAAGCCCTGCCCTCACTAGGGAGGCCCAGGATTGGGCGGCTCACCTGGTGAGCATCAACACACTGATGAATAGTGGCAAAGGCCACGGGGAGAACATATTCTACTGCTCTGGCTCCAGCACAGCGACCCCTACTGGATCAGATGTGGCCGAGTCTTGGTACAAGGAGATTGAGAAGTATAATTTCTCATCCCCTGGTTTTCAGAGTGGAGCAGGTAATTTCACTCAAATGGTCTGGAAGTCCTCAAAGCAAGTAGGCGTGGGTTTGGCGACCAGTGGGCGGGGCACGTTTATCGCCGTGGCGTTCTACGATCCAGCGGGCAACATCACCAACCCAGGCTATTTCCATGACAACGTGAAAACCAAAGGAAGCACACTTTAGTCTGAgccatatgtactgtatgtatgccgGCACTCCCAAAGGTTTCTATAGGAACGGGTGCTTATCTGGGCAAACACGTTGTTGCTGTTATCTTTGGTTGTTGCTATGATTTGTCCTCTTTTGGAAGGCTAAGAATCGTTTTTTGTTAGTTCATTGTTTTCCATAGATGGCGCCATTCGAACGCGCCACGCAGTTGCCAGGAGCCATCAGTGTAGACGGCCGTTGCACGGCCGTTGCGAGACAAACCTGACCTTAACTTTTTTAACTTCTATCTCAAATGATACCCTTACATTGTTATTTTCTAACCAACAACAGTAATTTGGGAAATCTGTATAAATGGATTTTACGTTGTCTTAATAGGAAATAATTTTAATGGTTATGGGTATTTTTTCATAACTGCAATATACAAGTAAGATTTTCACCGGACAGTTTCTTTTATAAATTCATTTTTCTGTTACCTCGAGTTATTTGGCTTTGAACTCGTCCTATAatcgtatttgtggccaaagcataaactggagaaaaaaaatccacctCAAATAGACAGTTTCAtaaatgcttgctatttcctcatagaacaTGATGTCACGTTGGCTCGCTGAGCAGGCCAATCAGTGGTCAACTTGCATGAACATTTCTAATGACGGGtatactcccacaccattctgttgttggggtatgtcCAAGCCATTCacccgcgggacggttgagctaatgcgATTAGCTGTAGGTCATATTTCGTAGAAAACGCTGGACAGTTACTTAAAACCCGAAATGTAATGCCTTTAATCTCGTGCACGTTTTTGTAATTTACTGTCCATGAATAGAGAAATGTCGCTTTTTAAATGTATTCAATGATGTTTATCAAACATGTTGACATATAGACTGAGACTGCACTGTGTTGACATACAACGGGCAATAAATGGTGGAATTACATGTTTGTTGGTTGTAACATTTGTGCCACACTTTGAAAAAAATATTCAACGAGAGCTTACATCTAGTTAGCATCCTTGCTGCCGTCTTCCACCAGCAGAGGGAAACAGCTTGTTGTTACCTTTCACTGTATTCCCTGTCAAATAAACAGACAATCTAACTGGA

Function

NR:

description
uncharacterized protein LOC109868363 isoform X1

GO: NA

KEGG:

id description
K24835 GLIPR2; glioma pathogenesis-related protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976830.1 False 2912 mRNA 0.48 12 13782097 13795573
XM_036976829.1 True 2883 mRNA 0.48 12 13782097 13797656

Neighbor

gene id symbol gene type direction distance location
zgc:55461 tubb4b coding downstream 11501 13766485 ~ 13770596 (-)
pole3 pole3 coding downstream 169264 13608582 ~ 13612833 (-)
lrsam1 lrsam1 coding downstream 181077 13580344 ~ 13601020 (-)
ndor1 ndor1 coding downstream 223924 13544228 ~ 13558173 (-)
ier5l LOC106570852 coding downstream 661801 13117989 ~ 13120296 (-)
si:dkey-220k22.1 LOC106570374 coding upstream 95280 13892936 ~ 13973261 (-)
LOC110523244 LOC106570388 coding upstream 175642 13973298 ~ 13982903 (-)
scai LOC106570398 coding upstream 193641 13991297 ~ 14030388 (-)
LOC118964563 NA coding upstream 206649 14004305 ~ 14005852 (-)
LOC110523246 ppp6c coding upstream 241722 14039378 ~ 14052301 (-)
G370072 NA non-coding downstream 46494 13735211 ~ 13735603 (-)
G370057 NA non-coding downstream 66828 13715026 ~ 13715269 (-)
G370056 NA non-coding downstream 68992 13712863 ~ 13713105 (-)
G370042 NA non-coding downstream 82668 13699178 ~ 13699429 (-)
G370036 NA non-coding downstream 92139 13689532 ~ 13689958 (-)
G370141 NA non-coding upstream 87561 13885217 ~ 13886506 (-)
G370250 NA non-coding upstream 238567 14036223 ~ 14036462 (-)
G370251 NA non-coding upstream 238869 14036525 ~ 14036808 (-)
G370278 NA non-coding upstream 292337 14089993 ~ 14090353 (-)
G368921 NA other downstream 1076005 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 1645307 12134052 ~ 12136790 (-)
G365752 NA other downstream 4591999 9189669 ~ 9190098 (-)
G364754 NA other downstream 4731389 9047542 ~ 9099000 (-)
G364322 NA other downstream 5477914 8303267 ~ 8304183 (-)
G370333 NA other upstream 409534 14207190 ~ 14208705 (-)
G370635 NA other upstream 629682 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 1195472 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 1325819 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 1898436 15693396 ~ 15707607 (-)

Expression


Co-expression Network