gpr107 (LOC106570369)


Basic Information

Item Value
gene id gpr107
gene name LOC106570369
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 13818327 ~ 13850807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601762.2
TTTTATGCGTCAGTGCGTAAATCCTGCCGGAAGTATGTTTCTTGCAAGTATGCTTTTTTAGAAAAATGGCGACCGACAAAATATATATGTTTACGGCTACTAttgtgttatttttgttatttctcaGAGAAAGCCATTGCAGGTTACATCATCTTAAACTCGAGGATGACATTCGACAGAAAGTCCACCTGAACACTTTTGGCTTCTACAAACATGGTTACATGATAGTGAATATGTCCAGTCTTACCCTTACTGGGGAGGATCTGGACAAGATTGACAGCTCCACGGTTGGATTCAGTCTGGATAGGACAAGCAGCAATGGCTTCTCTACGTATTTAgatGATCAAGATCTGGACTACTGTGTCCTTAAGAAGTCTCCCAGCAGTGACGTCGCTGTGGCATTGCTGTTATTTGACTTCAAGAAAAATGAGGTGAAGATGAAGATGTCATCTGAGGAGAATGTGTTCCCTGACATCCTCCCTGGCCTCAAAGAGACAATAGGCATTGAGACTGGAGCTGACCAACAGAAACATGTAAAGGGGAAAGATGACACAAACCCTGTGGGAGACCATGGTGATGGTGAGAGTAAACCCAAGCGGGATGTTGCAGAGAAAAAGTCTGAAGTGCCTTTTCCACTCCATAGAAACAAAGAAGTCTTCTCCTTTCAGTTTCACTTCAACGTCAGCACAGACGAGCAGCAAGGCCTGTACAACTTCTACTTCCACAACTGCTACAGCAAAGACACTCAGATGGTTAACCCCCTCCGCTTCAGCATTGAAATCAACATCGAGGAGAAGAACCCCAACAGCTTCCTGTCTGCTGGGGAGATCCCCCTGCCCAAGCTCTACATCATCATGTCTATGTTCTTCTTTTTCCTCGGCACACTGTGGTTGCACGTTCTCCGCACTCAGCGTGCTGATGTCTATAAAATCCACTGGCTCATGACTGCTCTCCCCTTCACCAAGTCTCTATCACTCATCTTCCACGCGATTgactactactacatctctaaCCAGGGCTTCCCCATAGAAGGATGGGCTGTGGTCTActacatcactcacctACTGAAGGGGGCACTCTTATTCATCACCATTGCTCTGATAGGGACCGGCTGGGCTTTTGTCAAGCACATTCTCTCGGATAAGGACAAGAAGATCTTCATGATTGTCATTCCACTACAGGTGCTGGCCAACGTGGCATACATCATCTTGGAGTCCACAGAGGAGGGCACAACGGAGTACGGCCTGTGGAAAGAGGTGCTCTTCCTGGTGGACCTGCTGTGCTGCGGCGCCATCCTCTTCCCCGTGGTCTGGTCCATCAGACATTTACAAGAGGCCTCATCAACAGATGGGAAAGCTGCTATCAACCTTGCCCAGTTGAAGCTCTTCAGGCACTACTATGTGATGattGTATGCTATATTTATTTCACCCGTATAATCGCAATTCTCATCAAGTTCATTGTTCCCTTTCAGTGGAAGTGGCTGTACCAGCTATTGGATGAGCTGGCCACGCTGGCATTCTTCTTCCTGACGGGCCATAAGTTCCGCCCGGCCTCCTACAACCCCTACCTGCTGCTCTCTGTGGAGGACGACGTGGAGATGGAGGAAGTAATAATGACCTCAACGGCGATGGGAGATGGAGTGAAGAAAGTGAAGAGGAGTGCAAATGGACCGACGGAAGAGCGGGAGAGCATGGCCTGATGGGAGATGTAGTACCCCAGCTCAGCCAAATACAGCGTCTCTGGACTATGTGGTCACAAGTGTGGCGACGGACACTCATTGCCCAGACATGAATTCTTAACCCACTTCACTTGTGTGTGGGTAACAGCCCAATATTAACTGGGGAACCTCCAACTATGGTTTAACAATGGTGGTTCTAACTGTATCTATGTGTATGTTAATGTATATCAATGAAATGACCCTCTGAATCAGAATTATCCTTTGATGTTAGAGTGAAGGAAATGTGGGGACTCCAAGTAACTAAGGCCACAATTCCTTGTCTGTTTTAATTGATACACTGAGGCTGCTGTGCTTGGTAATTATTTGTctttgttattatttattttctaatGTACATGCAGCATGATATCTCCTGTGACTCACCatctgccacacacacaaacaacaaaatACGTTCTGATGAGACAATGTCAAAAGCCAGTGGTAAAGAACACTATTTATTTATCCCTTCTTGCAAACCATAAAGTGGAAAAACTTAACTTCTAGTTTTAATGAAATACAGCATCTCACAAACTGACGGAtcactttttaaaatatattttttaagttaTTTGTGTTGTGCATCAGATTATTTCTGTTTTCCCTATTCTTCCTTAATTTGTGGTGCTTCATCTGCAGTGGAGTGGTACTGTGACTTATGTTTGTGAGATGCTTACAGATGCCCATTTGGGTCAAGGTTCCCTGCCTCGTGTGAGTCTAGCTTGTGGGTTGCAATTTGTTTTGTCAGCAAGTCATTTTCAGGGAAAAATCCATTGGCCCGTCAAGTTTTATTTTTGGTAGCAATGAAACTTGTCTAACTGCTTGAGAAACTGAGGCGCCATATAGAATATCCAATATCTTGATGTACTTTTACTTCTCCCTATACCAACCATATGGTCAGAGGTGACTGATAAATGTATTTAAAGTCAGTATGGCCAAAGCGGAAGACCACATCTTCAGTGGCGGAGAGGGGTATACTGACCGATGATGCCATTATTTGTTGATCAAGATGTTGCTATGTCTATATTTTGTTTATATAACAGTAATGCAAAACACATTGGCCTCCAGACCAGAAAGCAATGGGAGATAGATAATTATGTTTGCTGATGTTTGATGTTGCACATAAGCTGTGTTTGTTTAAAGACTCCATATATCGTTAAATTACAAAAGGAGATGAACAACCATGTAAATACTTTATCCTCTGTTCATAAAGGCTTTTTTGATCCTCAA

Function

NR:

description
protein GPR107-like isoform X1

GO: NA

KEGG:

id description
K22985 GPR107; G protein-coupled receptor 107

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601762.2 True 2948 mRNA 0.44 18 13818327 13850807

Neighbor

gene id symbol gene type direction distance location
LOC110523240 fpgs coding upstream 297 13806785 ~ 13818030 (+)
lmo4a lmo41 coding upstream 133187 13668173 ~ 13685140 (+)
ccn1l1 LOC106570334 coding upstream 166492 13647485 ~ 13651835 (+)
LOC118964562 NA coding upstream 174199 13613034 ~ 13644128 (+)
LOC118964768 NA coding upstream 212506 13605700 ~ 13605821 (+)
ncs1a ncs1 coding downstream 9645 13860452 ~ 13882141 (+)
arpc5l arpc5l coding downstream 135888 13986695 ~ 13990227 (+)
LOC110523252 LOC106570453 coding downstream 277752 14128559 ~ 14142466 (+)
LOC110523253 LOC106570436 coding downstream 297625 14148432 ~ 14231585 (+)
mmp11b LOC106570480 coding downstream 421498 14272305 ~ 14308719 (+)
G369770 LOC106570345 non-coding upstream 20570 13782269 ~ 13797757 (+)
G369742 NA non-coding upstream 94377 13723686 ~ 13723950 (+)
G369741 NA non-coding upstream 95885 13722083 ~ 13722442 (+)
G369734 NA non-coding upstream 102300 13715784 ~ 13716027 (+)
G369730 NA non-coding upstream 104904 13713139 ~ 13713423 (+)
G369805 NA non-coding downstream 5757 13856564 ~ 13856861 (+)
G369820 NA non-coding downstream 33469 13884276 ~ 13886502 (+)
G369819 NA non-coding downstream 35996 13886803 ~ 13892285 (+)
G369892 NA non-coding downstream 133569 13984376 ~ 13984624 (+)
G369878 NA non-coding downstream 140541 13991348 ~ 13995454 (+)
G369763 NA other upstream 49031 13765247 ~ 13769296 (+)
G368440 NA other upstream 709193 13108696 ~ 13109134 (+)
G367684 NA other upstream 1938292 11878329 ~ 11880035 (+)
G366973 NA other upstream 2389617 11425642 ~ 11428710 (+)
G366748 NA other upstream 2841175 10976682 ~ 10977152 (+)
G370360 NA other downstream 404996 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 470297 14321104 ~ 14325895 (+)
G370414 NA other downstream 516865 14367672 ~ 14368161 (+)
LOC118964542 LOC106569496 other downstream 953854 14798616 ~ 14805526 (+)
LOC110519479 LOC106596183 other downstream 1197371 15047739 ~ 15054353 (+)

Expression


Co-expression Network