Item | Value |
---|---|
gene id | arpc5l |
gene name | arpc5l |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 13986695 ~ 13990227 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
arpc5l | Predicted to enable actin filament binding activity. Predicted to be involved in Arp2/3 complex-mediated actin nucleation and cell migration. Located in extracellular exosome and focal adhesion. |
description |
---|
actin-related protein 2/3 complex subunit 5-like protein |
id | name | namespace |
---|---|---|
GO:0030833 | regulation of actin filament polymerization | biological_process |
GO:0005856 | cytoskeleton | cellular_component |
GO:0005737 | cytoplasm | cellular_component |
id | description |
---|---|
K05754 | ARPC5; actin related protein 2/3 complex, subunit 5 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
NM_001165172.1 | True | 1383 | mRNA | 0.43 | 4 | 13986695 | 13990227 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
ncs1a | ncs1 | coding | upstream | 104554 | 13860452 ~ 13882141 (+) |
gpr107 | LOC106570369 | coding | upstream | 135888 | 13818327 ~ 13850807 (+) |
LOC110523240 | fpgs | coding | upstream | 168665 | 13806785 ~ 13818030 (+) |
lmo4a | lmo41 | coding | upstream | 301555 | 13668173 ~ 13685140 (+) |
ccn1l1 | LOC106570334 | coding | upstream | 334860 | 13647485 ~ 13651835 (+) |
LOC110523252 | LOC106570453 | coding | downstream | 138332 | 14128559 ~ 14142466 (+) |
LOC110523253 | LOC106570436 | coding | downstream | 158205 | 14148432 ~ 14231585 (+) |
mmp11b | LOC106570480 | coding | downstream | 282078 | 14272305 ~ 14308719 (+) |
LOC110523258 | LOC106570496 | coding | downstream | 355406 | 14345633 ~ 14347412 (+) |
LOC110523259 | odf2 | coding | downstream | 361226 | 14351453 ~ 14367540 (+) |
G369892 | NA | non-coding | upstream | 2071 | 13984376 ~ 13984624 (+) |
G369819 | NA | non-coding | upstream | 94410 | 13886803 ~ 13892285 (+) |
G369820 | NA | non-coding | upstream | 100193 | 13884276 ~ 13886502 (+) |
G369805 | NA | non-coding | upstream | 129834 | 13856564 ~ 13856861 (+) |
G369785 | NA | non-coding | upstream | 132526 | 13800355 ~ 13854169 (+) |
G369878 | NA | non-coding | downstream | 1121 | 13991348 ~ 13995454 (+) |
G369936 | NA | non-coding | downstream | 37446 | 14027673 ~ 14034826 (+) |
G369942 | NA | non-coding | downstream | 45531 | 14035758 ~ 14035999 (+) |
G369943 | NA | non-coding | downstream | 47631 | 14037858 ~ 14038094 (+) |
G369921 | LOC100380848 | non-coding | downstream | 49300 | 14039527 ~ 14040898 (+) |
G369763 | NA | other | upstream | 217399 | 13765247 ~ 13769296 (+) |
G368440 | NA | other | upstream | 877561 | 13108696 ~ 13109134 (+) |
G367684 | NA | other | upstream | 2106660 | 11878329 ~ 11880035 (+) |
G366973 | NA | other | upstream | 2557985 | 11425642 ~ 11428710 (+) |
G366748 | NA | other | upstream | 3009543 | 10976682 ~ 10977152 (+) |
G370360 | NA | other | downstream | 265576 | 14255803 ~ 14259133 (+) |
G370382 | smarcb1 | other | downstream | 330877 | 14321104 ~ 14325895 (+) |
G370414 | NA | other | downstream | 377445 | 14367672 ~ 14368161 (+) |
LOC118964542 | LOC106569496 | other | downstream | 814434 | 14798616 ~ 14805526 (+) |
LOC110519479 | LOC106596183 | other | downstream | 1057951 | 15047739 ~ 15054353 (+) |