LOC118964564 (gstt2b)


Basic Information

Item Value
gene id LOC118964564
gene name gstt2b
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14090638 ~ 14092907 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051645.1
GTTTAGGGGTAGAACTGTCCAATAAATTCAAGGAATCAGTTGGGAGAGCGACTATTGAAGATGGCTTTAGAAATGTATTTAGACCTTTTCAAGGAGAACAACATTCCTTTTGATTTCAAAACTGTTTCACTTATGGAAGCATTGCCATTATGAAGTACCTGGCATAGAAGCACAAGACCGCAGACCACGGGAATCCAGCCGACCTGCAGAAGCTCACCCGTGTCAATGAAGAACTGTCCTGGCAGCACATGGGAATACGTATGCATGGCTCCAAGATGTATTGGCTCAGGCTGTTGATACCAAAGATCATGGGTGTGGAAGTCCCCAAGGACAAGATGGATAGAGCCCTGGAGGACCTGGAGGGCTGGTCGAGAACATGGACGGCAGGTCTTCAAGCCCAAGATCTTGAGATTGTTCTTCTGAATTCTCCAGTGACAGTGCAGTGAAGCTGGTCCTCTGTGAAATAATCAAGCTGGATCTGTTATTCAGCCACTATGCACCATGTaacataataacaaaataaaacattctCTATGGAAATTCA
>TU420828
ATCAGTTGGGAGAGCGACTATTGAAGATGGCTTTAGAAATGTATTTAGACCTTTTCAAGGAGAACAACATTCCTTTTGATTTCAAAACTGTTTCACTTATGGAAGCATTGCCATTATGAAGTACCTGGCATAGAAGCACAAGACCGCAGACCACGGGAATCCAGCCGACCTGCAGAAGCTCACCCGTGTCAATGAAGAACTGTCCTGGCAGCACATGGGAATACGTATGCATGGCTCCAAGATGTATTGGCTCAGGCTGTTGATACCAAAGATCATGGGTGTGGAAGTCCCCAAGGACAAGATGGATAGAGCCCTGGAGGACCTGGAGGGCTGGTCGAGAACATGGACGGCAGGTCTTCAAGCCC

Function

symbol description
gstt2b Predicted to enable glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Predicted to act upstream of or within cellular response to leukemia inhibitory factor. Located in cytosol and nucleoplasm.

NR:

description
glutathione S-transferase theta-2B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051645.1 False 544 mRNA 0.45 3 14090638 14092907
TU420828 True 365 lncRNA 0.48 3 14090783 14092873

Neighbor

gene id symbol gene type direction distance location
p2rx4a p2rx4 coding downstream 10024 14063020 ~ 14080614 (-)
si:dkey-220k22.3 LOC106570668 coding downstream 29922 14057565 ~ 14060716 (-)
LOC110523246 ppp6c coding downstream 38337 14039378 ~ 14052301 (-)
scai LOC106570398 coding downstream 60250 13991297 ~ 14030388 (-)
LOC118964563 NA coding downstream 85946 14004305 ~ 14005852 (-)
LOC110523249 LOC106570430 coding upstream 9420 14102327 ~ 14104808 (-)
LOC110523251 LOC106570444 coding upstream 12858 14105765 ~ 14128552 (-)
LOC118964565 NA coding upstream 77514 14170421 ~ 14172474 (-)
LOC118964566 NA coding upstream 129282 14222189 ~ 14225345 (-)
LOC118964567 LOC106570461 coding upstream 150147 14243054 ~ 14243735 (-)
G370278 NA non-coding downstream 285 14089993 ~ 14090353 (-)
G370251 NA non-coding downstream 53830 14036525 ~ 14036808 (-)
G370250 NA non-coding downstream 54176 14036223 ~ 14036462 (-)
G370141 NA non-coding downstream 204132 13885217 ~ 13886506 (-)
G370258 NA non-coding upstream 4488 14097395 ~ 14097887 (-)
G370256 LOC100194703 non-coding upstream 6125 14099032 ~ 14100477 (-)
G370297 NA non-coding upstream 46946 14139853 ~ 14140429 (-)
G370286 NA non-coding upstream 50373 14143280 ~ 14145174 (-)
G368921 NA other downstream 1384546 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 1953848 12134052 ~ 12136790 (-)
G365752 NA other downstream 4900540 9189669 ~ 9190098 (-)
G364754 NA other downstream 5039930 9047542 ~ 9099000 (-)
G364322 NA other downstream 5786455 8303267 ~ 8304183 (-)
G370333 NA other upstream 114283 14207190 ~ 14208705 (-)
G370635 NA other upstream 334431 14427338 ~ 14428591 (-)
LOC110524957 LOC106569957 other upstream 900221 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 1030568 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 1603185 15693396 ~ 15707607 (-)

Expression


Co-expression Network