Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964566 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 14222189 ~ 14225345 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051647.1 | False | 308 | mRNA | 0.37 | 3 | 14222189 | 14222618 |
| XR_005051648.1 | True | 330 | mRNA | 0.38 | 5 | 14222189 | 14225345 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964565 | NA | coding | downstream | 49715 | 14170421 ~ 14172474 (-) |
| LOC110523251 | LOC106570444 | coding | downstream | 93637 | 14105765 ~ 14128552 (-) |
| LOC110523249 | LOC106570430 | coding | downstream | 117381 | 14102327 ~ 14104808 (-) |
| LOC118964564 | gstt2b | coding | downstream | 129282 | 14090638 ~ 14092907 (-) |
| p2rx4a | p2rx4 | coding | downstream | 141575 | 14063020 ~ 14080614 (-) |
| LOC118964567 | LOC106570461 | coding | upstream | 17709 | 14243054 ~ 14243735 (-) |
| chchd10 | chchd10 | coding | upstream | 30455 | 14255800 ~ 14259132 (-) |
| smarcb1b | LOC100380734 | coding | upstream | 88369 | 14313714 ~ 14333305 (-) |
| LOC110523260 | NA | coding | upstream | 123971 | 14346815 ~ 14350281 (-) |
| dync2i2 | wdr34 | coding | upstream | 204124 | 14429469 ~ 14433766 (-) |
| G370341 | NA | non-coding | downstream | 2022 | 14219258 ~ 14220167 (-) |
| G370314 | NA | non-coding | downstream | 45107 | 14176471 ~ 14177082 (-) |
| G370298 | NA | non-coding | downstream | 72121 | 14148496 ~ 14150068 (-) |
| G370287 | NA | non-coding | downstream | 74645 | 14145455 ~ 14147544 (-) |
| G370286 | NA | non-coding | downstream | 77015 | 14143280 ~ 14145174 (-) |
| G370315 | NA | non-coding | upstream | 1282 | 14226627 ~ 14231588 (-) |
| G370352 | NA | non-coding | upstream | 19080 | 14244425 ~ 14251246 (-) |
| G370622 | NA | non-coding | upstream | 84945 | 14310290 ~ 14310506 (-) |
| G370646 | NA | non-coding | upstream | 113951 | 14339296 ~ 14339515 (-) |
| G370648 | NA | non-coding | upstream | 116866 | 14342211 ~ 14342538 (-) |
| G370333 | NA | other | downstream | 13484 | 14207190 ~ 14208705 (-) |
| G368921 | NA | other | downstream | 1516097 | 12705566 ~ 12706092 (-) |
| G368612 | ctxn3 | other | downstream | 2085399 | 12134052 ~ 12136790 (-) |
| G365752 | NA | other | downstream | 5032091 | 9189669 ~ 9190098 (-) |
| G364754 | NA | other | downstream | 5171481 | 9047542 ~ 9099000 (-) |
| G370635 | NA | other | upstream | 201993 | 14427338 ~ 14428591 (-) |
| LOC110524957 | LOC106569957 | other | upstream | 767783 | 14988147 ~ 14995197 (-) |
| G371294 | LOC106569911 | other | upstream | 898130 | 15123475 ~ 15124789 (-) |
| LOC110523302 | NA | other | upstream | 1470747 | 15693396 ~ 15707607 (-) |
| G372122 | NA | other | upstream | 1750261 | 15975606 ~ 15976116 (-) |
