LOC118964781



Basic Information


Item Value
gene id LOC118964781
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14396810 ~ 14396945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005051974.1
GCCTGGTAGTTCCTAGAAAAAGCTGAACTGTGCTGATCTATAGGTTTTTGATTGACTGGCAAATATATACTCTGTGATTTTATGCATGGGAGTTGCCACTCCAAGTATCCTTCATAGCCCAGTTGCAGAGACATTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005051974.1 True 136 mRNA 0.41 1 14396810 14396945

Neighbor


gene id symbol gene type direction distance location
LOC110523259 odf2 coding upstream 29270 14351453 ~ 14367540 (+)
LOC110523258 LOC106570496 coding upstream 49398 14345633 ~ 14347412 (+)
mmp11b LOC106570480 coding upstream 88091 14272305 ~ 14308719 (+)
LOC110523253 LOC106570436 coding upstream 167502 14148432 ~ 14231585 (+)
LOC110523252 LOC106570453 coding upstream 254344 14128559 ~ 14142466 (+)
uap1l1 uap1l1 coding downstream 41171 14438116 ~ 14447360 (+)
LOC110523268 LOC106570653 coding downstream 148624 14545569 ~ 14547879 (+)
fam102ab LOC106569988 coding downstream 150998 14547943 ~ 14630069 (+)
LOC110523269 LOC106569993 coding downstream 245828 14642773 ~ 14672009 (+)
dpm2 NA coding downstream 281175 14678120 ~ 14684431 (+)
G370458 NA non-coding upstream 26579 14369995 ~ 14370231 (+)
G370457 NA non-coding upstream 27072 14369502 ~ 14369738 (+)
G370403 NA non-coding upstream 27325 14369009 ~ 14369485 (+)
G370455 NA non-coding upstream 45668 14350840 ~ 14351142 (+)
G370428 NA non-coding upstream 51260 14344984 ~ 14345550 (+)
G370472 NA non-coding downstream 4894 14401839 ~ 14402147 (+)
G370407 wdr34 non-coding downstream 33902 14430847 ~ 14431069 (+)
G370476 NA non-coding downstream 35082 14432027 ~ 14432389 (+)
G370406 wdr34 non-coding downstream 35704 14432649 ~ 14432907 (+)
G370413 NA non-coding downstream 36487 14433432 ~ 14433707 (+)
G370414 NA other upstream 28649 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 70915 14321104 ~ 14325895 (+)
G370360 NA other upstream 137677 14255803 ~ 14259133 (+)
G369763 NA other upstream 627514 13765247 ~ 13769296 (+)
G368440 NA other upstream 1287676 13108696 ~ 13109134 (+)
LOC118964542 LOC106569496 other downstream 407716 14798616 ~ 14805526 (+)
LOC110519479 LOC106596183 other downstream 651233 15047739 ~ 15054353 (+)
G371182 NA other downstream 727345 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 1394614 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1822661 16218328 ~ 16220933 (+)

Expression



Co-expression Network