pkn3 (pkn3)


Basic Information

Item Value
gene id pkn3
gene name pkn3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14460818 ~ 14480420 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601809.2
AAACCATCGGCCGTGTGTAATGCCAGGAAGTCCAGACAGTTTGCTTTTGCCACCAAATCTATTCAATGGATGAGGAACTGGTACGTGCGAACGCTTTACTGCGCCTTGGTCACTTTTTGTAACTTTTACAACTTTTAGTTGTCGGTCGTGGTGTTTTAACTGGTTATAAAGTTGTTCAATTGTGTTTCTTTCGAGCGAAACTGGACGAGACGCTGACTTGAGCTGTGGTCAGTGTATGGCTATTTTCCCAACCCTCCCAGTTTGAAATCAATAATCGCGTTTCTGACATTTTGAGTCTGACATGGCAGGTTTAACACTACAGCACCTGCCTGCGGGCCGGTTGGACGGGGACATACTGGACCCGGAGTTCCAGCAGCGGCTGGAAGACGCACGCACCCTGCTGAGGCAGGAGATCCAGCGGGAGCTGAAGATCAAGGAGGCGGCCGAGAGGCTGCGGCGGGCTGTTACTAACCGTAAGAGCGCCGCCGAAGTGGAGGGCCAGCTGAGGGCGTCGAGCCGCAAGCTGGAGCAACTGCACTGGGAGCTGCAGGAGCTCAACACCCGTGCCATCACCCCCAAGCCCCAGAAGGACAGCCCCACAGATGGCAGCACGTCGCCTGACCCATGTCGCTGGGAGGAGGTGACATCCCCGCTTGCCGGGCGCATCTGTGCCCTGAAGAAACAGCTCACCATGGAGACCAAGGTGAAGCAGGGGGCCGAGAACATCATCCAGACTTACGTCAGCAGCTCCGTCAAGGACCGTAAGATGCTGTCCATGGCCCAGCAGATGCTTCAGGACAGCCGCACCAAGATTGAGCTGCTCCGCATGCAGATTGTCAAAGTCACCCAAGctagagagggggagcgggaagCCACAGAGACAGACggCCGTCCCTCTGAGACTATCAGTCCTCTAGAGCTGCGGGTGGCTGAGCTACGGCATCACCTGAAGATCGAGGCTGCCGTGGCAGAGGGGGCCAAGAATGTGGTCAAGCACCTGGGCGGGCGCAAGGTGCAGGACCGCCGCGCACTGGCAGAGGCCCAGACAAGGTTGCAGGAGTCGAGCCAGAAGCTGGACCTGCTGCGTCTGTCTCTGGAGCGCCGTCTAGCCGAGCTGCCCGGGGACCACCCCAAACTGTCTGTTATCAAGGAGGAGCTCACACTGGGTGCCTCCTCGCCCTCCCTGGGTCTGCAGCTGGAGCGCCTCAACTCCACCTCTTCCTGTTCGTCGTCCTCCTTCTTCAAACCTGCCACTCTCACAGGTCGGTTGGAGGTGCGtctgatgggttgccaggacctgCAGGAGTCCGTGCCAGGTCGGTGCCGCATGGCCTGCATCACCTCCACCCCCGGCAGCCCCTCCGAAGCCAAGTCCCTGAAGATGAGGGCCGGTCTCTCCGGACGCAGCACCAATGGCAAAATCACCAAGACCGATGAGCTCTCCACGGAGATCATTGCGGTGCTGAAGGTGGACAACAGGTTGGTGGGCCGGACACACTGGAGAGCCCTGAGCAAGGACGCCTGGGACCAGAGCTTCAGCATCGAGCTGGAGCGGTCCAGGGAGCTGGAGATTGGGGTGTACTGGCGGGACTGGAGGGCTCTGTGTGGGGTCAAGTTCCTACGTCTAGAGGACTTCCTGGACAACCAGCGCCACGGCATGTGTCTTTACCTGGAACCCCAGGGCATGCTGTTCGCTGAGGTGACATTCATCAACCCTGTCATTGAGTGGCATCCTAAACTTCAGAGACAGAAGCGCATATTCCCTAAAGAAAAAGGGAAGAATTTCCTGCGGGCGGCCCAGATGAACATGAACTTTGCCACGTGGGGGCGTCTGATGATGAGCGTCCTGCCCCCCTGCAATGGTTCCTTGCAGGCCATGAGCCCCCCACTGGTGGGCTCTGACATGGCCATCACCTCGCCCCCCTCCATGGAGAAGATGGCCAAGTCCACCCCCCCTCTAAGAGATTCTGCTGTGGTGAAATTGGACTTCAGTGAGGAACGCCCCAACAATTCCCTGCAGAACAATGTGGGGAAAACTCTCGCATCAGAATCCATGTGGCAAACCACTCTCTCTCAGTCCTCTAAAGGTCATTCAACGGAGGATAACAGGACAACGCCCAAGCCAAAGACTGTATCTCAGCCTACTCCTaaGAGGGAAGTGAATGGTGGGATGCAAATGGAAGATTTCAACTGCGTCTCAGTTCTGGGGCGAGGACACTTTGGAAAGGTCTTGCTGGCAGAGTTCAAGAGGTCAGGCAAACTGTATGCCATCAAAGCCTTGAAGAAAGGGGACGTCGTGATGCGTGATGAAGTGGACAGTCTAATGTGTGAGAAGAGGATTTTTGAGACGATCAACTCCTCCCACCATCCCTTCCTGGTGAATCTGCACGGCTGTTTCCAGACGGCGGACCACGTGTGCTTTGTGATGGATTACTCCCCCGGGGGAGACCTCATGACCCACATACACACCAGCATCTTCACTGAGAGACAGGCTCAGTTCTATGCCTCCTGCGTGCTGCTGGGACTAGAGTTTCTGCACCAGAACAAGATAGTTTACCGggaTCTGAAGCTAGACAACCTGTTGATGGACGCAGATGGTTATGTGAGGATAGCAGACTTTGGATTGTGCAAGGAAGgtatgGGTCATGGAGACCGCACCTCCACGTTCTGCGGCACGCCAGAGTTCCTAGCCCCTGAGGTGCTGACAGACAACAACTATACCCGCTGTGTGGACTGGTGGGGCCTGGGTGTCCTCATCTACGAGATGCTGGTGGGAGAGTCTCCCTTCCCTGGTGACGATGAGGAGGAGGTGTTTGACAGCATAGTGAATGATGAGGTGCGCTACCCCAGGTTCCTCTCTCCAGAGTCTGTCTCCATCACCCAGAAGCTTCTACAAAAGAACCCTGAGAGAAGGCTGGGATCAGGAGAGCCGGATGCCAACGAGGTCAAGAAACACAGGTTCTTCCAGGGTGTGGACTGGGCGGCCTTGCTTCACAAAAAAGTGGTTCCTCCGTTCTTCCCGCGCATCAGGACGCCGGGGGACGTCAGTAACTTTGACGAGGAGTTCACAAAGCTCAAGCCAGTCCTCACCCCCCCACAGACACCCTACTTTCTCACTGCAGACCAACAGGAGATCTTTGCCGATTTTTGACTTttcctctctgcactgacctttTTTAAACATACACTGACGGATGGACAGACCGGACTGAAAGCCAAAACGGTTGCTGCTCCACTGAAGATGTTTCCTTTACTTCATTGTGTCAAACGGCTACCTGTGGCTGAATGAGTACTGACGACACAGGCTATCGTGATGTCCTCTTGGGTAGCCATCTTATCTTCAGGTCCATTACTGTTCATATGCTCCGTGGGTGATGAGAACTCCACCTGTACCTCTACAGCCAATCAGAACTGGGAACTCAGCCTGCCTTGTTCAAATCTGGATTGGTATGTCGGTGTCTCTGTGTTGGTGTTCAACATTGACTTTTATTACAACTGTACTGGTCTTTTTTCTTTTTCCTGTGAGGTTCCCACTCCATATTGATAGTATATCAACTAGGTTCGACATTGATATTGCCAAATCAATACTTGACATGCCACTGTTTTGGTGCTATGTCAACAATAATCAATAGGTATTAATTTGTGAAACTGAACAAGAGTACTTTGTTTCAAACATTGCACCAATGCAATAATGAGTTTTTTAATTGGTTCTAATTAGAAGGTTATGCATGACCTGCACCTCCTAACACTACACTCCATTCGTAAGAGTCTTTGCTGTAAATGAAGatagaaaaatatatttattgtaAACCCACTGCTGTTTTGGATCTTACACTGATTGTAGCGACTGATGTTTGTATGTTTAGCCTGGGAATCCAAACTGAATCGCCATTCGTTCCTAGGCTAGTGTATGTTATGTTAATGGAGGAAATGGTCCCTGAAGCTGTTTAAAAAGTGTATTGTGCTACTTTGAAATCAACCTATTCCATGGGTCCATCTTGGGCTGGTTTAGGCCATTGAATGTCATGTTGAAACTGACATCATCCTGAAGTATCTTTCTAAAAAAAATAGTAATTGTAAGTAAACTTTTTGGAAGGATTATAGTTTAAGTATTCCTAGGGAGTCATTTTCATTCCATTCCAGTAATGAGTATATTGCCATTTATATATTGTATTTCATATGAATATACATGCTTTATTACTAAAATATATATGCTGTGAATTACAATGAAAAAGATGCTGTGTCTAGAGATGAAACAAGTATGTTTTTCTTTACAATGCATGAAGGAAATGTAAATTAATAAATATATCTACTGGA

Function

symbol description
pkn3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation and signal transduction. Predicted to be located in several cellular components, including cleavage furrow; midbody; and nucleus. Orthologous to human PKN3 (protein kinase N3).

NR:

description
serine/threonine-protein kinase N2-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0007165 signal transduction biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K02677 PRKCA; classical protein kinase C alpha type

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601809.2 True 4317 mRNA 0.51 22 14460818 14480420

Neighbor

gene id symbol gene type direction distance location
LOC110523265 LOC106570595 coding downstream 22323 14434246 ~ 14438495 (-)
dync2i2 wdr34 coding downstream 27052 14429469 ~ 14433766 (-)
LOC110523260 NA coding downstream 110537 14346815 ~ 14350281 (-)
smarcb1b LOC100380734 coding downstream 127513 14313714 ~ 14333305 (-)
chchd10 chchd10 coding downstream 201686 14255800 ~ 14259132 (-)
slc25a25b LOC106570619 coding upstream 7330 14487750 ~ 14535122 (-)
LOC110523275 NA coding upstream 285756 14766176 ~ 14769160 (-)
nup188 nup188 coding upstream 411559 14891979 ~ 14911591 (-)
phyhd1 phyhd1 coding upstream 434445 14914865 ~ 14925540 (-)
LOC110523281 lrrc8a coding upstream 450448 14930868 ~ 14959152 (-)
G370629 NA non-coding downstream 40563 14413810 ~ 14420255 (-)
G370631 LOC102778734 non-coding downstream 50771 14409094 ~ 14410047 (-)
G370659 NA non-coding downstream 90546 14370067 ~ 14370272 (-)
G370658 NA non-coding downstream 91978 14368625 ~ 14368840 (-)
G370656 NA non-coding downstream 94974 14363537 ~ 14365844 (-)
G370710 NA non-coding upstream 45724 14526144 ~ 14526438 (-)
G370713 NA non-coding upstream 48684 14529104 ~ 14529556 (-)
G370729 LOC106570653 non-coding upstream 66464 14546884 ~ 14547869 (-)
G370762 NA non-coding upstream 106597 14587017 ~ 14588624 (-)
G370761 NA non-coding upstream 148681 14629101 ~ 14630064 (-)
G370635 NA other downstream 32227 14427338 ~ 14428591 (-)
G370333 NA other downstream 252113 14207190 ~ 14208705 (-)
G368921 NA other downstream 1754726 12705566 ~ 12706092 (-)
G368612 ctxn3 other downstream 2324028 12134052 ~ 12136790 (-)
G365752 NA other downstream 5270720 9189669 ~ 9190098 (-)
LOC110524957 LOC106569957 other upstream 512708 14988147 ~ 14995197 (-)
G371294 LOC106569911 other upstream 643055 15123475 ~ 15124789 (-)
LOC110523302 NA other upstream 1215672 15693396 ~ 15707607 (-)
G372122 NA other upstream 1495186 15975606 ~ 15976116 (-)
G372123 NA other upstream 1498082 15978502 ~ 15981215 (-)

Expression


Co-expression Network