pip5kl1 (LOC106570018)


Basic Information

Item Value
gene id pip5kl1
gene name LOC106570018
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14684594 ~ 14693573 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601821.2
TTTATCATCTGTGTGCCCGCATTATTTTCAGGTCACAGACATGAGCTAATGCTTTGTGAAAGGATATTTCTGGTGCAGCTTGTTGGGGGTTCCGCGCAGTGTCATTATCGCCACATCCCCGCTTGCGCGCATTCATTGAAAGAACGGATTGCTATGTCAATCGTGGATAGGAGGAATGCGCTGATCTCGGGAACTATAGAGCAGACACGGGAGGACCTGAATTAGTGGCATCGATGAGCCAAACTGAGATGGAGATGTCTGGGGTTCCGCCGGGGGTGACACGGAGGACTGGGACAGTGAAGAGGACGATGTGGGGGGGCCTGAGGCAGCAGTGGAAGCTACTGGGCCTGTTTGAGATTGACCAGCAGCACGAGTTCTACAGCCTCACCTCTATGATGAAGGAAGGTCTCTCTGCAGCCGTGCAGACCACCATCGACAACCCACCACCGgatGAATTGTCAGAAGATGATTACAGATTGGAAGTCACTCAAATACATAAGgactttAAAATGGAGACATTTGCAGGGCCAGTGTTTGCCAGCTTGCGTCGCTCCCTGGGAATGACAGAAAAGGAGTATCAGCATTCTCTCTCCTTCGATGGCTCATACCTGCAGTTCATCAGCAACTCCAAAAGCAAGGCTGACTTCTTTCTGACGAATGATAAGTGTTTTTTCCTGAAGACCCAGAATAAGAGAGAGGTGAAATTCCTCTTGTCCAATCTGAGAATCTACATGGAGCACCTAGAGAAGTATCCCCATTCACTGCTGGTCAAGTTCTTAGGTGTCCACAGGATAAACATTTCCCATAGGAGGAAGAAGTACTTTATTGTAATGCAGAGTGTTTTTTATCCTGACGATCGAATAAATGCCAGGTATGACATCAAGGGTTGTGAGGTGAGCCGGTGGACAGACCCCGCCCCTGAGGGTAGCCAGGTTATTGTTGTCCTCAAGGACTTGAACTTCAAGGGCCAGTATATCACTCTGGACCAGCAGCGGCCGTGGCTGCTCCGGCAGGTGGAGATTGACACGTCGTTCTTGCAGAGACTCAACGTGCTGGACTACAGCCTCCTGGTGGGCCATCAGCCCCTGCACCAGGACGAACGCCACCAGGGCCTCTCTTTTGCCACCCTTATCATGCGTACAAAAAAGTCAGTGATCACTGGCTCAAGCCCCACCCATGCGGGCATGCCCACTGTTCCAGGGGTGGTCCCAGAGGAAGACTCCACCCTGTCGGTGTCAGAGATGGATGGCGGGACAGGAAGTGGCAGCATTGCCGAATCACGGGGAGGAAGTGAACCGGGCAGTGCCCTTTCCGGGAGAACCTGTACTGAGCAGCCGGCCGGGTCGGTCACAGATTCGATGGTGCTCAGGGACTTCCAGGCCCAGAACCGCCGGCTGCTGCCCAACTTCAAGAACCCGCTACACGTCATTGACGGACCGGAGCATCGCTACTTTGTGGGCATCATTGACATCTTCACTGTCTACAGCTTCAAGAAGAGGCTGGAGCATTGGTGGAAGAGACTGCGGCACCCAGGGCAGGCCTTCTCCACCGTCAGCCCCACCTCTTACTGCCTTAGGCTCTGCCAGTGGGTACAGGACCACACCAAGTAGACTCAGAAAAAGGGGAGGATGAGGATGGTTAGTCCCAGTAGCAGACTGTCTGCCCAAGAACAAACGTTTGCATGCACACAAGTTGGACACTGACcagagacatgaagctatgcttTTAAAGCACTATAATTTCAGGATTGATCAAGGATCAGTTACTTTCATGTTTCCACATCTCCAAACCAAAGCTAAAACAAATATAAACCATTATATACAAATATAATATTCACCATCGCAAATTCATGGGTTTCCTTTTCATATTCTTTGTTAAGTAAAGAAAGAAAAAGGTGCGACATTTATAATCAAGTGCTATGAATTAATTAGCTGATTCTCCAAAGTATAATCGTTTTTTAATTGTTGAAGTTCAATTAGCAAGTGAATGCTGAAAACCAAATAATTGTACAAATTTGCCACCtcatatggattttttttttattgtacttTGAAGTGTTTATACCTGTGCAattttgttgtatttttaaaAGCTGTGTTTTCACTGTTCAACTGACCAAGTGAATATACTCTCCCGATATGATtgtgcagtatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaaca

Function

NR:

description
phosphatidylinositol 4-phosphate 5-kinase-like protein 1

GO: NA

KEGG:

id description
K13712 PIP5KL1; phosphatidylinositol-4-phosphate 5-kinase-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601821.2 True 2267 mRNA 0.48 10 14684594 14693573

Neighbor

gene id symbol gene type direction distance location
dpm2 NA coding upstream 163 14678120 ~ 14684431 (+)
LOC110523269 LOC106569993 coding upstream 12585 14642773 ~ 14672009 (+)
fam102ab LOC106569988 coding upstream 54525 14547943 ~ 14630069 (+)
LOC110523268 LOC106570653 coding upstream 136715 14545569 ~ 14547879 (+)
uap1l1 uap1l1 coding upstream 237234 14438116 ~ 14447360 (+)
sh3glb2b sh3glb2 coding downstream 13222 14706795 ~ 14759767 (+)
LOC110523276 NA coding downstream 91898 14785471 ~ 14793184 (+)
LOC118964542 LOC106569496 coding downstream 105199 14798616 ~ 14805526 (+)
cdk5rap2 LOC106570081 coding downstream 125736 14819309 ~ 14892194 (+)
dolk dolk coding downstream 218942 14901565 ~ 14916678 (+)
G370539 NA non-coding upstream 7407 14676112 ~ 14677187 (+)
G370575 NA non-coding upstream 42738 14641520 ~ 14641856 (+)
G370537 NA non-coding downstream 1577 14695150 ~ 14695702 (+)
G370867 NA non-coding downstream 42438 14736011 ~ 14749996 (+)
G370882 NA non-coding downstream 69978 14763551 ~ 14763750 (+)
G370883 NA non-coding downstream 70625 14764198 ~ 14764544 (+)
G370886 NA non-coding downstream 77464 14771037 ~ 14771236 (+)
G370414 NA other upstream 316433 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 358699 14321104 ~ 14325895 (+)
G370360 NA other upstream 425461 14255803 ~ 14259133 (+)
G369763 NA other upstream 915298 13765247 ~ 13769296 (+)
G368440 NA other upstream 1575460 13108696 ~ 13109134 (+)
LOC110519479 LOC106596183 other downstream 354605 15047739 ~ 15054353 (+)
G371182 NA other downstream 430717 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 1097986 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1526033 16218328 ~ 16220933 (+)

Expression


Co-expression Network