Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964542 |
| gene name | LOC106569496 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 14798616 ~ 14805526 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036976536.1 | False | 795 | mRNA | 0.55 | 3 | 14798772 | 14805526 |
| TU421527 | False | 202 | lncRNA | 0.48 | 1 | 14798616 | 14798817 |
| TU421530 | True | 657 | TUCP | 0.55 | 2 | 14804661 | 14805471 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523276 | NA | coding | upstream | 6223 | 14785471 ~ 14793184 (+) |
| sh3glb2b | sh3glb2 | coding | upstream | 39005 | 14706795 ~ 14759767 (+) |
| pip5kl1 | LOC106570018 | coding | upstream | 105199 | 14684594 ~ 14693573 (+) |
| dpm2 | NA | coding | upstream | 114341 | 14678120 ~ 14684431 (+) |
| LOC110523269 | LOC106569993 | coding | upstream | 126763 | 14642773 ~ 14672009 (+) |
| cdk5rap2 | LOC106570081 | coding | downstream | 13783 | 14819309 ~ 14892194 (+) |
| dolk | dolk | coding | downstream | 106989 | 14901565 ~ 14916678 (+) |
| dnlz | dnlz | coding | downstream | 189722 | 14995248 ~ 14999436 (+) |
| LOC110518391 | LOC106596183 | coding | downstream | 202264 | 15007790 ~ 15014612 (+) |
| LOC110523290 | LOC106596183 | coding | downstream | 222277 | 15027803 ~ 15034589 (+) |
| G370898 | NA | non-coding | upstream | 13523 | 14784948 ~ 14785249 (+) |
| G370897 | NA | non-coding | upstream | 13893 | 14784654 ~ 14784879 (+) |
| G370896 | NA | non-coding | upstream | 14278 | 14784288 ~ 14784494 (+) |
| G370895 | NA | non-coding | upstream | 14854 | 14783631 ~ 14783918 (+) |
| G370913 | NA | non-coding | downstream | 11233 | 14816759 ~ 14816984 (+) |
| G370841 | NA | non-coding | downstream | 120445 | 14925971 ~ 14930826 (+) |
| G370844 | lrrc8a | non-coding | downstream | 125392 | 14930918 ~ 14931459 (+) |
| G370852 | NA | non-coding | downstream | 134446 | 14939972 ~ 14940348 (+) |
| G370414 | NA | other | upstream | 430611 | 14367672 ~ 14368161 (+) |
| G370382 | smarcb1 | other | upstream | 472877 | 14321104 ~ 14325895 (+) |
| G370360 | NA | other | upstream | 539639 | 14255803 ~ 14259133 (+) |
| G369763 | NA | other | upstream | 1029476 | 13765247 ~ 13769296 (+) |
| G368440 | NA | other | upstream | 1689638 | 13108696 ~ 13109134 (+) |
| LOC110519479 | LOC106596183 | other | downstream | 242652 | 15047739 ~ 15054353 (+) |
| G371182 | NA | other | downstream | 318764 | 15124290 ~ 15128817 (+) |
| G371615 | LOC100194725 | other | downstream | 986033 | 15791559 ~ 15795122 (+) |
| G372281 | LOC106569177 | other | downstream | 1414080 | 16218328 ~ 16220933 (+) |
| G372373 | NA | other | downstream | 1930116 | 16735642 ~ 16738500 (+) |
| LOC118964542 | LOC106569496 | other | downstream | 5844 | 14798616 ~ 14805526 (+) |
