dolk (dolk)


Basic Information

Item Value
gene id dolk
gene name dolk
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 14901565 ~ 14916678 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601856.2
TGTTCGAGCTGGAGTCCTCTGCCATGAaccgccctccctccctgtcttctcccccgattgcaacCATGCAGACCAACCCGGTACTGGTGGAGTCTGCAGTGGTCTTCTCTGTGGTGATGTGTGTCCACATGGCCGTGTGGAATCAGCACTCCTGGTGCTGCGTGGCCCTGGTCATCCAGGCCTTCTACGTGCAGCACAAGTGGGACCGCCTGCTCCGTAATGGCAACGCCGTCTTTCAGTGGCGCCTGTCAGCCAACAGCGGCATCGTCCCAGCCGTCATGGTGATGCCCCTGCTGGGTGTGGCGCTGCGGGAGAAGTGCGCCGCCTCGGGGAACGTCTACTTTGAGCGTTTCTCCATGGTGGTCACAGTGACAGGCATGATGCTGGCACTGTTCCTGTCGCTCCTCGCGCTGGGCATCACAAGGCCAGTGCCCACCAACACATGCGTGATTGCTGGTGTGGCGAGCAGTGCCATCCTGTACACAGTGAAGCAGACCCTAACGGTGTCGGAGGTGATTGAGGTTCTGGAGGTGCTGCTGATATTCGTCTACCTGAGTCTGATCGTGCTCTACCTGCTACCGCGCTGCTTCACGCCCGGCGAGGCCCTCCTCATCGTCGGGGGCATCAGCTTCATCGTCAACCAGCTCATAAAGCGCTCACTCAACATGGCTGAGGTTAAAGGGGAGCCTGTCCACTACTTCCTGCCCGTGGTGGTGGTAGGATCTCTTCTCCTAGGGGTGTTTTTCGCCCTGCTCTTCTGCTTCATGGAGTCTGAGACCTGGGTGTCGTCGCTCTTCTTCCACATGATGACGGCTGTGCTGGGCCTGGGGATCCTCATGCCCTGGCTCTCCCTCCTCATCCGCCGCCACCCCATCATGTGGCTGCTGGACTTTGTGACTCTGAACGACAAGCGTCTGTGCCTGCTGGGGTACTGGGTGCTGTTGGCCACACTGGCCACCCTGGTTGTGCTGCACCAGAACTACCAGCGCCAGTCAGGCTCCAAGAAGCACCAGGCCTCTACGGTAGTCAGAAAGTACTTCCACCTCATTGTAGTAGCCACCTTCGTCCCAGGCCTGGTGTATGACCGCCAGCTCCTACACGTGGCGTCCGTGGGCTGCCTGGGGGCCTTCCTGCTCCTGGAGTATGTGCGCTACTTCCGCATCCGCCCGCTGGGTCAACTCCTCCGTCAGTTACTCACCCTGTTCCTGGACGAGCGTGACTCTGGACCTCTCATCCTCACCCACATCTACCTCCTCCTGGGCATGTCCCTGCCTATCTGGCTGTTCCCGGGGCCCTGCGCCCCCAAAGGCATCCTGCCCGGGGCGGGGGGCCTGGTGCCCTACGCCGGGGTGCTGGCGGTGGGTGTGGGGGACACAGTGGCGTCGGTGTTCGGCAGCAGCATGGGCGAGATCCGCTGGCCGGGCACCAAGAAGACAGTGGAGGGCACCGCCACGTCGGTATTTGCCCAGATCATCGCTGTGGCTATCTTCCTCATATTCGACCCCACCATCAATCTGAACTCCACCTACTCATGGATCGTGGGCTCCATCAccatggtagccatgctggaggCCTACACCTCGCAGATAGACAACCTGCTGCTCCCGCTTTACCTCTTCATCCTGCTGCTGCTCTGATGGCCCCCGTGGAGCACCGCACACAGGTCATGTTTGAGATCGACTACCTTGCAGTCGGCGGCGGCAGACTGACAGATCTGCAAATCATAGTGAGTATCCGTTTAGGATGCAAGGCGATTTGTAGATCAGTTGGTCTCCTCAGTCTGTGATCAGCGGCTGAGCAGATGCACTTAAACACAGCCACACGGTGACCTCTTGACCAGAGGTCAGAGTGGAAAGGCTAACCAATGTAATTTCTGAATTTTAAAGTCTAAGGGAATGTATGGAAATCCTCATTGGATGACTGaggattgttttgttttgttgctttGTGAGAGTAAAAGTTCTGATCTGTTATATTATGTTGCATTGATAATCTCTCCACTAACATGACCGTGTGTGGGAAAATCAATATGGCTGGCACAAAGAAGGATGAAGTACAATCTGATAGCACTGCTAGCTAGGGAATGAGCTTGCATACATTATGAGAAATACATGAAGACGGAACATACACTCTAGATTTTGCTCTTCATTTTGTGGGACAACAGCATGACAATAGAATCAGTGATGTTCAGCTAGAATACAACAAGTTGGTTCAAaatacacactttttttttttcatatcaGTTGCTTGGTGAGGATAAGGGAGGTTAAATAATTTTGTTTGAGagcagggtcgtattcattagggcacaccgtagcaaaatgtttGGCAACGAAAATGAAAACGAGCATTCCTCATTGGACAAGTTTGGGGTAGTCCCGccttgtttcagtctgttttattctgtttggtgcctaaccactgttgataatggctgaccctggccatgaccccactGCAAAGATGTCtcagagttgggatatgcaagaaaataatacatttccaattcacacatgcgtaTTAACACGTGTACATGTGTAAAATAGGACAAATAGAAGCacccacattattattattattattattattattagtgaatATGACCCAGCTCTGTCTTGATGGAGGTGGGGGATTCGAGGGACAGAGGATGAATGTCCCTGAGTCACTAACACGCTGAAATCCCAAACTACTGAATTATACAACAGGAGATGGAGTTCAGTACATTGGACAAAATGTATTTTAGCCAGAATTAAGTGTCCCTGCCCTGATCAGCAGTCATGGCAGACACTGGTTAATGGCACGTTTTAACAAATTGTGATGGGCTTCTTTTTTTTGCTAAAGGAAAGCTACCTTTGTACAGCCTTTTGAAGAACATCAtttgatcatttgtttttcagagcatttttttgttgttacaaTTTCATCTGACTATAATATATTTGCATTTCTTGTTGTGGCAATATTACGGACTGATTGCGGGACATATTTGCCTTAAAGAAGTATATTTTGTATCACACATTACCTAGTACTGTAGGTACTCTAGCTGACAGCATGGTTTGTGTTGAAGTAGACTGGTTGATTCTTCAATATGGCAGCAGTTTATACACTATAGCATGACATTTAAACATTTTGAAATCCTTTACTGTAACTTGTATACAGAAATTACCCTACAGTGTCTTTTCAGTTTTGTATGAATCCTTTGTCTTTTATCCGGGTGTTTTGATAGGACCCTCTCCAAAATATACATGAATTTCCTTAACGTTCACCCCCCCCAAAATCTGATTTGTATATTGGAAATCAATTGTAGAGATGATATAACAGGGCCACATGTCATGAACATATTGAATTCATGTTTTGTTAAATTTTGAAGTGATTAAATTCATTTCCTGATAGTGTTTATAAGCTGCAGGAAGGTATGTATTTATGGTGTAATGAAAGTAACTACATGTACCTTTTTAAAATTAAATCAGCTAACATTGAGATGCTATACTAGTTATCTGTAGATGTATCTTTCGCTATCtggctgtgtttagacaggcagcccaattcttctgatatttttccactaattagtcttgaccaatcagatcagcttgTTATCAGAATTgatctgcctgtgtaaacgcctctaagtcagacaTGTCACGTTAAACTACAACTGTCcatagcagtggaggctgctgaggggaggatgactcaatgtctggaatggagcgaatgtaatggcatcaaacacatggagaccatgtatttgataccaatccgctccagccattaccagaagcccatcctccccaaataaggtaccaccaacctcctgtggtccatAGGAGCCTCTGCGTTCCCATAGCCTAGTTAAACTAGACCGAAATTGGCACTCAAACCATAGAGTGCACATTGAGTCTGGTACAGCCAGGCTCCAATTCCCCTTCCTCCAGTTTACTGTGCATTCTGGAGAGACCTTCTCTTTTTATAATGTTTGTTTACTTGTTTTCTCAGCATGGAACTGACAGTATTTGATGAATCTGTAATAAATAAGTAGTATTTTGTTTGTTGCCTTTTCCAATAATCCGTAATGATAATTTATGAGCTTTTTCTTGCCTTTGACAGGAAACACTTGTATTGCATGGCAGATTGTTGCATCATTAAAGGCCTTTTATGCTA
>TU421438
ACTTCCCCCCCCCCCCCCCCAAAATCTGATTTGTATATTGGAAATCAATTGTAGAGATGATATAACAGGGCCACATGTCATGAACATATTGAATTCATGTTTTGTTAAATTTTGAAGTGATTAAATTCATTTCCTGATAGTGTTTATAAGCTGCAGGAAGGTATGTATTTATGGTGTAATGAAAGTAACTACATGTACCTTTTTAAAATTAAATCAGCTAACATTGAGATGCTATACTAGTTATCTGTAGATGTATCTTTCGCTATCtggctgtgtttagacaggcagcccaattcttctgatatttttccactaattagtcttgaccaatcagatcagcttgTTATCAGAATTgatctgcctgtgtaaacgcctctaagtcagacaTGTCACGTTAAACTACAACTGTCcatagcagtggaggctgctgaggggaggatgactcaatgtctggaatggagcgaatgtaatggcatcaaacacatggagaccatgtatttgataccaatccgctccagccattaccagaagcccatcctccccaaataaggtaccaccaacctcctgtggtccatAGGAGCCTCTGCGTTCCCATAGCCTAGTTAAACTAGACCGAAATTGGCACTCAAACCATAGAGTGCACATTGAGTCTGGTACAGCCAGGCTCCAATTCCCCTTCCTCCAGTTTACTGTGCATTCTGGAGAGACCTTCTCTTTTTATAATGTTTGTTTACTTGTTTTCTCAGCATGGAACTGACAGTATTTGATGAATCTGTAATAAATAAGTAGTATTTTGTTTGTTGCCTTTTCCAATAATCCGTAATGATAATTTATGAGCTTTTTCTTGCCTTTGACAGGAAACACTTGTATTGCATGGCAGATTGTTGCATCATTAAAGG

Function

symbol description
dolk Predicted to enable dolichol kinase activity. Predicted to be involved in dolichyl monophosphate biosynthetic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Im. Orthologous to human DOLK (dolichol kinase).

NR:

description
PREDICTED: dolichol kinase

GO:

id name namespace
GO:0043048 dolichyl monophosphate biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0030176 integral component of endoplasmic reticulum membrane cellular_component
GO:0004168 dolichol kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601856.2 False 4164 mRNA 0.48 1 14912515 14916678
TU421438 True 899 lncRNA 0.40 2 14901565 14916666
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Neighbor

gene id symbol gene type direction distance location
cdk5rap2 LOC106570081 coding upstream 20321 14819309 ~ 14892194 (+)
LOC118964542 LOC106569496 coding upstream 106989 14798616 ~ 14805526 (+)
LOC110523276 NA coding upstream 119966 14785471 ~ 14793184 (+)
sh3glb2b sh3glb2 coding upstream 152748 14706795 ~ 14759767 (+)
pip5kl1 LOC106570018 coding upstream 218942 14684594 ~ 14693573 (+)
dnlz dnlz coding downstream 78570 14995248 ~ 14999436 (+)
LOC110518391 LOC106596183 coding downstream 91112 15007790 ~ 15014612 (+)
LOC110523290 LOC106596183 coding downstream 111125 15027803 ~ 15034589 (+)
LOC110519479 LOC106596183 coding downstream 131061 15047739 ~ 15054353 (+)
LOC110518158 LOC106596183 coding downstream 148949 15065627 ~ 15075700 (+)
G370913 NA non-coding upstream 95531 14816759 ~ 14816984 (+)
G370898 NA non-coding upstream 127266 14784948 ~ 14785249 (+)
G370897 NA non-coding upstream 127636 14784654 ~ 14784879 (+)
G370841 NA non-coding downstream 9293 14925971 ~ 14930826 (+)
G370844 lrrc8a non-coding downstream 14240 14930918 ~ 14931459 (+)
G370852 NA non-coding downstream 23294 14939972 ~ 14940348 (+)
G370948 NA non-coding downstream 26013 14942691 ~ 14942915 (+)
G370951 NA non-coding downstream 30221 14946899 ~ 14947168 (+)
G370414 NA other upstream 544354 14367672 ~ 14368161 (+)
G370382 smarcb1 other upstream 586620 14321104 ~ 14325895 (+)
G370360 NA other upstream 653382 14255803 ~ 14259133 (+)
G369763 NA other upstream 1143219 13765247 ~ 13769296 (+)
G371182 NA other downstream 207612 15124290 ~ 15128817 (+)
G371615 LOC100194725 other downstream 874881 15791559 ~ 15795122 (+)
G372281 LOC106569177 other downstream 1302928 16218328 ~ 16220933 (+)
G372373 NA other downstream 1818964 16735642 ~ 16738500 (+)

Expression

dolk(dolk) Expression in all Baseline Samples

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dolk(dolk) Expression in each Bioproject

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dolk(dolk) Expression in each Sample
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Co-expression Network