Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110519479 |
| gene name | LOC106596183 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 15047739 ~ 15054353 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| low choriolytic enzyme-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036976895.1 | False | 1181 | mRNA | 0.46 | 10 | 15047739 | 15054353 |
| TU421788 | True | 636 | TUCP | 0.47 | 6 | 15048178 | 15053556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523290 | LOC106596183 | coding | upstream | 13150 | 15027803 ~ 15034589 (+) |
| LOC110518391 | LOC106596183 | coding | upstream | 33127 | 15007790 ~ 15014612 (+) |
| dnlz | dnlz | coding | upstream | 48303 | 14995248 ~ 14999436 (+) |
| dolk | dolk | coding | upstream | 131061 | 14901565 ~ 14916678 (+) |
| cdk5rap2 | LOC106570081 | coding | upstream | 155545 | 14819309 ~ 14892194 (+) |
| LOC110518158 | LOC106596183 | coding | downstream | 11274 | 15065627 ~ 15075700 (+) |
| LOC110519478 | LOC106596183 | coding | downstream | 32525 | 15086878 ~ 15096757 (+) |
| uck1 | LOC106569943 | coding | downstream | 62871 | 15117198 ~ 15187954 (+) |
| LOC110523300 | LOC105028392 | coding | downstream | 410202 | 15464555 ~ 15591443 (+) |
| st6galnac4 | st6galnac4 | coding | downstream | 695838 | 15750191 ~ 15756190 (+) |
| G371113 | NA | non-coding | upstream | 74665 | 14972729 ~ 14973074 (+) |
| G371111 | NA | non-coding | upstream | 75949 | 14971481 ~ 14971790 (+) |
| G371101 | NA | non-coding | upstream | 84808 | 14962632 ~ 14962931 (+) |
| G371094 | NA | non-coding | upstream | 88244 | 14959238 ~ 14959495 (+) |
| G370961 | NA | non-coding | upstream | 88997 | 14958511 ~ 14958742 (+) |
| G371170 | NA | non-coding | downstream | 12672 | 15067025 ~ 15088540 (+) |
| G371171 | NA | non-coding | downstream | 23354 | 15077707 ~ 15100378 (+) |
| G371172 | LOC106569911 | non-coding | downstream | 26339 | 15080692 ~ 15102326 (+) |
| G371139 | NA | non-coding | downstream | 36614 | 15090967 ~ 15150407 (+) |
| LOC118964542 | LOC106569496 | other | upstream | 242268 | 14798616 ~ 14805526 (+) |
| G370414 | NA | other | upstream | 679578 | 14367672 ~ 14368161 (+) |
| G370382 | smarcb1 | other | upstream | 721844 | 14321104 ~ 14325895 (+) |
| G370360 | NA | other | upstream | 788606 | 14255803 ~ 14259133 (+) |
| G369763 | NA | other | upstream | 1278443 | 13765247 ~ 13769296 (+) |
| G371182 | NA | other | downstream | 69937 | 15124290 ~ 15128817 (+) |
| G371615 | LOC100194725 | other | downstream | 737206 | 15791559 ~ 15795122 (+) |
| G372281 | LOC106569177 | other | downstream | 1165253 | 16218328 ~ 16220933 (+) |
| G372373 | NA | other | downstream | 1681289 | 16735642 ~ 16738500 (+) |
| G372618 | LOC105030512 | other | downstream | 1816081 | 16870434 ~ 16882185 (+) |
