LOC118964741 (LOC106569911)


Basic Information

Item Value
gene id LOC118964741
gene name LOC106569911
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15125762 ~ 15127293 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979091.1
CTGCATCGTCTGAGGAATTGTCTGAGGAAGTTCAACGGAGAGGAGCAGAAATTGCAAGCATGTATAAAGCACAGCTGAAAGAGAGGATGGCCcaaaagagaaaggaagagattCTGAAGAAAATGGCAAACAACGATGACAAGAACGATGACACTGAGGCCTCCTGCTCCTCTGCAGTAAAACGATCTAATACCCCTGCCACAGCCCCCGAGCGCCCGGCCAGCCCAGAGGCCACGCCAGTGGCCGCCCGAGAAGACACTCAGGGGGACACCCAGCAGGACCTGGCAGAGGTTGTGAATGTGCTCAAGAGGCAATCATCTGATCTATACCTGCCTGACGACGTTTGTGAGGAGTCACTCACATGGAAATCCATTTACGAGGAGCTGTGCCCGCTCGCTCACAGAGTGAACACAGAAGCTGACTACATCAAGGCGCTTCGCGTCATCACTGAGAATGCTGTGACTCCCTCGTGCTCGTCTGAGGATGATGTGTCTCAGAGTGTGAGTGAGGACACAAGTCAGGAGGGGAGTAGTAAAAGTGAGGAGAGCATGAGTGGACAACAGCAGAAATGTCTACACAGGGATCCTTATGGTAAGAGGGACAGGAAGGAGATTGATAGTGGTAAAATGGAAGGGAGATTTGCAACCGCCAATGCAATGTGTATGATGGCGAGCCGAGGGATAGAAGAACTTAATGCCATGAGCTACGCAGACAGGATCAAATATTTCAAGTATGAGGCTAAGAGAAATGAAGAGATGAAGATTGAAAGGAGGAAGGAAAAAGCCAGGGACGAAGAGCTCAAAAAGTGGGAAAAGAGACAGAAGAAATTGAATGAGGAGGAAAGGAAAAGGAcagaaaatatggaaaaaaacAAGTTAGAGGAGCAGAGGAAAAGGGAGAAGGCAGAGATGAAACTAAAGATCGAACATGAGAAAAAGAGACAAGAGCAAGAGAaaaagatggagaaacagagggcagaggaagagaaaaagatggagaaacagagggcAGAGAAGTTGAaaaagatggagaaacagaggatggaggaggagagggacagggaaaaGGAGAGAATGAAGGTGTTGGAGATGCAGCAAAAGGCacgagagaaagaagagaagaggaggaaagaggaacaGAAAAGGAGATTGAAGATACAACAGGAACAAGAGAAGGAGGAACAGAAAAGGCAGACAAGGATACGGGACGAGGATAAGAAGAGAGCAGAGTTTCAAAGAATAAAAGATCACGAGGCCAGGTTCAAGATGGAGATGGAGAAACtgtatgagagagaagagaggaatgcACAGATTGAAAGAGAAAAGAGGCGTGCGCTGTGTCAGAAaaaaggacagacacagagagcaaaACAGGTGGTGGCATACGAGGTCACAGCGTCTACATCTGACGCCTCTGTgcggagggaagagagagagcagcgtCCAGAGACCGCTCACGCACAGTCTGCAAAGAGGAGAACAAGGAAGAAGCAGAAGAAAGCGGCGGACGAGGCATCGACAACTTTTCAGTAG

Function

NR:

description
golgin subfamily A member 6-like protein 22, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979091.1 True 1532 mRNA 0.48 1 15125762 15127293

Neighbor

gene id symbol gene type direction distance location
LOC110511258 dnlz coding downstream 4031 14996578 ~ 15121731 (-)
LOC110523286 LOC106569911 coding downstream 8697 15098785 ~ 15117065 (-)
LOC110523297 LOC106569911 coding downstream 43174 15078799 ~ 15082588 (-)
LOC110519481 LOC106569911 coding downstream 64378 15056380 ~ 15061384 (-)
LOC110516435 LOC106569911 coding downstream 82284 15036595 ~ 15043478 (-)
LOC118936653 LOC106569911 coding upstream 303 15124103 ~ 15129366 (-)
LOC118936652 LOC106569911 coding upstream 4215 15081830 ~ 15136742 (-)
LOC118964536 LOC106596987 coding upstream 6574 15133867 ~ 15134505 (-)
LOC118964537 LOC106569911 coding upstream 7399 15134692 ~ 15135479 (-)
LOC110523287 LOC106569911 coding upstream 8308 15135601 ~ 15138027 (-)
G371289 NA non-coding downstream 23106 15102335 ~ 15102656 (-)
G371271 NA non-coding downstream 29106 15051764 ~ 15096656 (-)
G371274 NA non-coding downstream 71844 15033715 ~ 15053918 (-)
G371272 NA non-coding downstream 73799 15031800 ~ 15051963 (-)
G371285 NA non-coding upstream 21254 15148547 ~ 15149001 (-)
G371331 NA non-coding upstream 77650 15204943 ~ 15206323 (-)
G371356 NA non-coding upstream 124621 15251914 ~ 15252125 (-)
G371364 NA non-coding upstream 126884 15254177 ~ 15254802 (-)
G371294 LOC106569911 other downstream 973 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 130603 14988147 ~ 14995197 (-)
G370635 NA other downstream 697171 14427338 ~ 14428591 (-)
G370333 NA other downstream 917057 14207190 ~ 14208705 (-)
G368921 NA other downstream 2419670 12705566 ~ 12706092 (-)
LOC110523302 NA other upstream 568799 15693396 ~ 15707607 (-)
G372122 NA other upstream 848313 15975606 ~ 15976116 (-)
G372123 NA other upstream 851209 15978502 ~ 15981215 (-)
LOC110523341 LOC106569324 other upstream 1806942 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1996744 17124037 ~ 17125807 (-)

Expression


Co-expression Network