LOC118964536 (LOC106596987)


Basic Information

Item Value
gene id LOC118964536
gene name LOC106596987
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15133867 ~ 15134505 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976527.1
atggagaaacagagggcAGAGAAGTTGAaaaagatggagaaacagaggatggaggaggagagggacagggaaaaGGAGAGAATGAAGGTGTTGGAGATGCAGCAAAAGGCacgagagaaagaagagaagaggaggaaagaggaacaGAAAAGGAGATTGAAGATACAACAGGAACAAGAGAAGGAGGAACAGAAAAGGCAGACAAGGATACGGGACGAGGATAAGAAGAGAGCAGAGTTTCAAAGAATAAAAGATCACGAGGCCAGGTTCAAGATGGAGATGGAGAAACtgtatgagagagaagagaggaatgcACAGATTGAAAGAGAAAAGAGGCGTGCGCTGTGTCAGAAaaaaggacagacacagagagcaaaACAGGTGGTGGCATACGAGGTCACAGCGTCTACATCTGACGCCTCTGTgcggagggaagagagggagcagcGTCCAGAGACCGCTCACGCACAGTCTGCAAAGAGGAGAACAAGGAAGAAGCAGAAGAAAGCGGCGGACGAGGCATCGACAACTTTTCAGTAGATGACAAAAGAAAGGGAGCAGACAAAAGAAGAAATGTACAAGTCAATGCTCCTAGGTATGTTGATAGATGTAAATAAACAAGAGTTTTTTTTaagagaa

Function

NR:

description
uncharacterized protein KIAA1211 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976527.1 True 639 mRNA 0.46 1 15133867 15134505

Neighbor

gene id symbol gene type direction distance location
LOC118936652 LOC106569911 coding downstream 408 15081830 ~ 15136742 (-)
LOC118936653 LOC106569911 coding downstream 4501 15124103 ~ 15129366 (-)
LOC118964741 LOC106569911 coding downstream 6574 15125762 ~ 15127293 (-)
LOC110511258 dnlz coding downstream 12136 14996578 ~ 15121731 (-)
LOC110523286 LOC106569911 coding downstream 16802 15098785 ~ 15117065 (-)
LOC118964537 LOC106569911 coding upstream 187 15134692 ~ 15135479 (-)
LOC110523287 LOC106569911 coding upstream 1096 15135601 ~ 15138027 (-)
rapgef1b LOC106569917 coding upstream 14933 15149438 ~ 15225332 (-)
setx LOC106569805 coding upstream 475841 15610346 ~ 15679579 (-)
LOC110523302 NA coding upstream 559100 15693396 ~ 15707607 (-)
G371289 NA non-coding downstream 31211 15102335 ~ 15102656 (-)
G371271 NA non-coding downstream 37211 15051764 ~ 15096656 (-)
G371274 NA non-coding downstream 79949 15033715 ~ 15053918 (-)
G371272 NA non-coding downstream 81904 15031800 ~ 15051963 (-)
G371285 NA non-coding upstream 14042 15148547 ~ 15149001 (-)
G371331 NA non-coding upstream 70438 15204943 ~ 15206323 (-)
G371356 NA non-coding upstream 117409 15251914 ~ 15252125 (-)
G371364 NA non-coding upstream 119672 15254177 ~ 15254802 (-)
G371294 LOC106569911 other downstream 9078 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 138708 14988147 ~ 14995197 (-)
G370635 NA other downstream 705276 14427338 ~ 14428591 (-)
G370333 NA other downstream 925162 14207190 ~ 14208705 (-)
G368921 NA other downstream 2427775 12705566 ~ 12706092 (-)
G372122 NA other upstream 841101 15975606 ~ 15976116 (-)
G372123 NA other upstream 843997 15978502 ~ 15981215 (-)
LOC110523341 LOC106569324 other upstream 1799730 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1989532 17124037 ~ 17125807 (-)

Expression


Co-expression Network