LOC118964537 (LOC106569911)


Basic Information

Item Value
gene id LOC118964537
gene name LOC106569911
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15134692 ~ 15135479 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976528.1
CTGCATCGTCTGAGGAATTGTCTGAGGAAGTTCAACGGAGAGGAGCAGAAATTGCAAGCATGTATAAAGCACAGCTGAAAGAGAGGATGGCCcaaaagagaaaggaagagattCTGAAGAAAATGGCAAACAACGATGACAAGAACGATGACACTGAGGCCTCCTGCTCCTCTGCAGTAAAACGATCTAATACCCCTGCCACAGCCCCCGAGCGCCCGGCCAGCCCAGAGGCCACGCCAGTGGCCGCCCGAGAAGACACTCAGGGGGACACCCAGCAGGACCTGGCAGAGGTTGTGAATGTGCTCAAGAGGCAATCATCTGATCTATACCTGCCTGACGACGTTTGTGAGGAGTCACTCACATGGAAATCCATTTACGAGGAGCTGTGCCCGCTCGCTCACAGAGTGAACACAGAAGCTGACTACATCAAGGCGCTTCGCGTCATCACTGAGAATGCTGTGACTCCCTCGTGCTCGTCTGAGGATGATGTGTCTCAGAGTGTGAGTGAGGACACAAGTCAGGAGGGGAGTAGTAAAAGTGAGGAGAGCATGAGTGGACAACAGCAGAAATGTCTACACAGGGATCCTTATGGTAAGAGGGACAGGAAGGAGATTGATAGTGGTAAAATGGAAGGGAGATTTGCAACCGCCAATGCAATGTGTATGATGGCGAGCCGAGGGATAGAAGAACTTAATGCCATGAGCTACGCAGACAGGATCAAATATTTCAAGTATGAGGCTAAGATTGAAAGGAGGAAGGAAAAAGCCAGGGACGAAGAGCTCAAAAAG

Function

NR:

description
golgin subfamily A member 6-like protein 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976528.1 True 788 mRNA 0.51 1 15134692 15135479

Neighbor

gene id symbol gene type direction distance location
LOC118964536 LOC106596987 coding downstream 187 15133867 ~ 15134505 (-)
LOC118936652 LOC106569911 coding downstream 1233 15081830 ~ 15136742 (-)
LOC118936653 LOC106569911 coding downstream 5326 15124103 ~ 15129366 (-)
LOC118964741 LOC106569911 coding downstream 7399 15125762 ~ 15127293 (-)
LOC110511258 dnlz coding downstream 12961 14996578 ~ 15121731 (-)
LOC110523287 LOC106569911 coding upstream 122 15135601 ~ 15138027 (-)
rapgef1b LOC106569917 coding upstream 13959 15149438 ~ 15225332 (-)
setx LOC106569805 coding upstream 474867 15610346 ~ 15679579 (-)
LOC110523302 NA coding upstream 558126 15693396 ~ 15707607 (-)
dolpp1 dolpp1 coding upstream 588310 15723789 ~ 15734869 (-)
G371289 NA non-coding downstream 32036 15102335 ~ 15102656 (-)
G371271 NA non-coding downstream 38036 15051764 ~ 15096656 (-)
G371274 NA non-coding downstream 80774 15033715 ~ 15053918 (-)
G371272 NA non-coding downstream 82729 15031800 ~ 15051963 (-)
G371285 NA non-coding upstream 13068 15148547 ~ 15149001 (-)
G371331 NA non-coding upstream 69464 15204943 ~ 15206323 (-)
G371356 NA non-coding upstream 116435 15251914 ~ 15252125 (-)
G371364 NA non-coding upstream 118698 15254177 ~ 15254802 (-)
G371294 LOC106569911 other downstream 9903 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 139533 14988147 ~ 14995197 (-)
G370635 NA other downstream 706101 14427338 ~ 14428591 (-)
G370333 NA other downstream 925987 14207190 ~ 14208705 (-)
G368921 NA other downstream 2428600 12705566 ~ 12706092 (-)
G372122 NA other upstream 840127 15975606 ~ 15976116 (-)
G372123 NA other upstream 843023 15978502 ~ 15981215 (-)
LOC110523341 LOC106569324 other upstream 1798756 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1988558 17124037 ~ 17125807 (-)

Expression


Co-expression Network