dolpp1 (dolpp1)


Basic Information

Item Value
gene id dolpp1
gene name dolpp1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 15723789 ~ 15734869 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473431.2
TCACCGGTGTCCGGGAAAAATGGCGTCTGAAGAACAGTGCTCGGTACCACTTCGATGGCGGTCGATATCGCTAACCCACATAGAGTTCCCTGCTGGTGATCTGACTGGACAAATGTTGGCCTACACCAGCCTGCTGCCCATAGCGATCCTCGTAGGCTTTGTCACCCTCATAGTGTTCAAGCGTGAACTGCACACGATCTCCTCCTTCGGTGGGCTCGTCCTGAACGAAGGTGTGAATTGGCTGCTGAAGCATATTCTACGGGAGCCCCGCCCATGTGAAGGAGCTCACACAACCCTGACAACAGAGTATGGGATGCCCTCCAGTCATTCCCAGTTCATCTGGTTTTTTGTTGTTTACTTCTTTCTTTTCCTTTATTTAAGAATGCATCAAACGAACAACGCTCGGTGTGTGGAGCTGCTGTGGAGACACATACTGTCCATCACCTTGTTGGGCGTGGCCTTATCAGTGTCATACAGCAGGGTGTACCTGTTGTACCACACTTGGAGTCAGGTCTTCTATGGGGGAGTGGCCGGTAGCACCATAGGAGTAGTCTGGTTCTTCTTCACACAGGAGGTGCTGACACCGCTATTCCCCAAGATAGCAGCATGTGTGTctccattttttattttgtccCACCTCTCTCGCCATCCTTGACTGCTGACAGGCCGATATCAGAGTTCTTTCTGGTGCGGGACACAAGCCTGATCCCCAACATCCTTTGGTTTGAGTACACAGTGACCAGGTCAGAGGCGAGAAACAGACAACGGAAGCTTGGAACAAAGCTTCAGTGATCTCAGCAGTTCCTTGGAGAAATTGAGTAaaggaacatacacacacactctcactcactcactcattaaaAAACACACTGGAGAATCAATTATCTTCTGGACTGACCTGGTTGAAATGGTATAAAGGCCATCGATTTACAGGTGGACCAAAAGAGTGTCTGGACTCGGCCCGGATTCCACAGCCTTAGCAAGTCCGTCCATATGCCTCTCCTTGTATAGCTTGCCGAAATGCTCCCCCAATGCATGCAAGACTGTGCAAGAGGTATACTATTTAATGATAAattaatataaactcagcaaaaaaagaaacatcctctcactgtcaactgcgtttattttcagaaaacttaacttgtgtaaatatttgtctGAACATAAcgagattcaacaactgagacataaactgaacaagttccaatgTCATGTGACTAACAAATGGAATGTGTCAAAgggggtgtcaaaatcaaaagtaacagtcagtatctggtgtggccacctgctgcattaagtactgaagtgcatctcctcctcatggactgcaccagatttgccagttcttgctgtgagatgttaccccactcttccaccaaggcacctgca
>XM_021601889.2
TCACCGGTGTCCGGGAAAAATGGCGTCTGAAGAACAGTGCTCGGTACCACTTCGATGGCGGTCGATATCGCTAACCCACATAGAGTTCCCTGCTGGTGATCTGACTGGACAAATGTTGGCCTACACCAGCCTGCTGCCCATAGCGATCCTCGTAGGCTTTGTCACCCTCATAGTGTTCAAGCGTGAACTGCACACGATCTCCTCCTTCGGTGGGCTCGTCCTGAACGAAGGTGTGAATTGGCTGCTGAAGCATATTCTACGGGAGCCCCGCCCATGTGAAGGAGCTCACACAACCCTGACAACAGAGTATGGGATGCCCTCCAGTCATTCCCAGTTCATCTGGTTTTTTGTTGTTTACTTCTTTCTTTTCCTTTATTTAAGAATGCATCAAACGAACAACGCTCGGTGTGTGGAGCTGCTGTGGAGACACATACTGTCCATCACCTTGTTGGGCGTGGCCTTATCAGTGTCATACAGCAGGGTGTACCTGTTGTACCACACTTGGAGTCAGGTCTTCTATGGGGGAGTGGCCGGTAGCACCATAGGAGTAGTCTGGTTCTTCTTCACACAGGAGGTGCTGACACCGCTATTCCCCAAGATAGCAGCATGGCCGATATCAGAGTTCTTTCTGGTGCGGGACACAAGCCTGATCCCCAACATCCTTTGGTTTGAGTACACAGTGACCAGGTCAGAGGCGAGAAACAGACAACGGAAGCTTGGAACAAAGCTTCAGTGATCTCAGCAGTTCCTTGGAGAAATTGAGTAaaggaacatacacacacactctcactcactcactcattaaaAAACACACTGGAGAATCAATTATCTTCTGGACTGACCTGGTTGAAATGGTATAAAGGCCATCGATTTACAGGTGGACCAAAAGAGTGTCTGGACTCGGCCCGGATTCCACAGCCTTAGCAAGTCCGTCCATATGCCTCTCCTTGTATAGCTTGCCGAAATGCTCCCCCAATGCATGCAAGACTGTGCAAGAGGTATACTATTTAATGATAAattaatataaactcagcaaaaaaagaaacatcctctcactgtcaactgcgtttattttcagaaaacttaacttgtgtaaatatttgtctGAACATAAcgagattcaacaactgagacataaactgaacaagttccaatgTCATGTGACTAACAAATGGAATGTGTCAAAgggggtgtcaaaatcaaaagtaacagtcagtatctggtgtggccacctgctgcattaagtactgaagtgcatctcctcctcatggactgcaccagatttgccagttcttgctgtgagatgttaccccactcttccaccaaggcacct

Function

symbol description
dolpp1 Predicted to enable dolichyldiphosphatase activity. Predicted to be involved in lipid biosynthetic process and protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle. Predicted to be integral component of endoplasmic reticulum membrane. Orthologous to human DOLPP1 (dolichyldiphosphatase 1).

NR:

description
dolichyldiphosphatase 1-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K07252 DOLPP1; dolichyldiphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473431.2 False 1392 mRNA 0.47 8 15723789 15734869
XM_021601889.2 True 1333 mRNA 0.47 8 15723792 15734869

Neighbor

gene id symbol gene type direction distance location
LOC110523302 NA coding downstream 16182 15693396 ~ 15707607 (-)
setx LOC106569805 coding downstream 44210 15610346 ~ 15679579 (-)
rapgef1b LOC106569917 coding downstream 498457 15149438 ~ 15225332 (-)
LOC110523287 LOC106569911 coding downstream 585762 15135601 ~ 15138027 (-)
LOC118964537 LOC106569911 coding downstream 588310 15134692 ~ 15135479 (-)
miga2 miga2 coding upstream 5204 15740073 ~ 15752753 (-)
spout1 spout1 coding upstream 36036 15770905 ~ 15775789 (-)
kyat1 LOC106569847 coding upstream 41040 15775909 ~ 15786131 (-)
surf6 surf6 coding upstream 51599 15786468 ~ 15788812 (-)
rpl7a rpl7a coding upstream 56642 15791511 ~ 15795413 (-)
G372015 NA non-coding downstream 37678 15685898 ~ 15686111 (-)
G371956 NA non-coding downstream 116156 15598237 ~ 15607633 (-)
G371954 NA non-coding downstream 116622 15603974 ~ 15607167 (-)
G371994 NA non-coding downstream 128505 15593717 ~ 15595284 (-)
G372054 NA non-coding upstream 81971 15816840 ~ 15817633 (-)
G372056 NA non-coding upstream 84115 15818984 ~ 15819222 (-)
G372058 NA non-coding upstream 86816 15821685 ~ 15821906 (-)
G372059 NA non-coding upstream 87589 15822458 ~ 15822944 (-)
G372060 NA non-coding upstream 88432 15823301 ~ 15823630 (-)
G371294 LOC106569911 other downstream 599000 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 728630 14988147 ~ 14995197 (-)
G370635 NA other downstream 1295198 14427338 ~ 14428591 (-)
G370333 NA other downstream 1515084 14207190 ~ 14208705 (-)
G372122 NA other upstream 240737 15975606 ~ 15976116 (-)
G372123 NA other upstream 243633 15978502 ~ 15981215 (-)
LOC110523341 LOC106569324 other upstream 1199366 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 1389168 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1754157 17483696 ~ 17521507 (-)

Expression


Co-expression Network